Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03079 ATGGAGAATCAAGAAAAGATTGGAGAAACGTTTGAGACGTTCAAATGGACCATTAAGGACTTCTATAAGTTGAAATCCAAGAAGATTTACTCTCAGAACTTCTACATTGGTGGTCATTCATGGCGGATTCTTATGTATCCAAAGGGAAACAAGGTGGATTACTTGTCAATTTATTTAGATGCTGGTACTTTGCCTGATGTAGAGACCAGATTTTCCAAGTTTAAGTTGGTTCTAATTAATCAGGTCAATGACAAATTGACACAGATAAAAGAAACTCAACACACATTCAATGCCAGAGAGAGTGACTGGGGCTTCACATCGTTTATACCTTTAGCTGACCTTTATATTTATAACAAGGGATTTATTGTGAATGACACTTGTATAAGTGAAGCTAGGATTTCCATTAGCCGCCCAGAACTTGAGAAAAAGGTTGATGAAGCTGCTCCACCAGTTTCTGTGCAAGTTCCTGCTAAGCCTATTGAACATGCTGATAATCCTTTACCTATGGACATGTCTGCAATCCCAATTGATGAGCTTGTTGATTTCAGGGGTTTAGGGAAAATAGAAAAAGCGTTTGTTCCTCTTCTAGATGAAGTATGTGCAAAGCATCCCTCAGTTATTGGATGCCAGAAGAAGAGAAGTCGAAGGTTTAGCGAATGGGCATTCACGGCTTTGGGAAGAGTTCTGCATTTCCTCAAGACTAAAAAGGCGAGAGATATGGATGAAGAGGCTTGTAGCCATCTTCAAATCTTATGGGAGGAACTCGAGACGTGTAGATTCAATTTAACTTGGCTGGAGCCACATGTTCAATCTGCCTTAGGTATGAAAAATTACATGGAAAGATCCGATAAGGTGAAAAGTGTGAAGGAGAATGTGGCTGCTCTGGAGATGGAAATGAAGAAGCTGAAGGCAATGGTTGCTTCCGTAGAAGTTGATCTTGAAATGGCAAGAAGAGAATTGGTGAAAGTTGAAGAAGGCTTTGAAGAGATAGATTTGGATGGTGAAGTAGGATATGGACCATAG 1023 0.3998 MENQEKIGETFETFKWTIKDFYKLKSKKIYSQNFYIGGHSWRILMYPKGNKVDYLSIYLDAGTLPDVETRFSKFKLVLINQVNDKLTQIKETQHTFNARESDWGFTSFIPLADLYIYNKGFIVNDTCISEARISISRPELEKKVDEAAPPVSVQVPAKPIEHADNPLPMDMSAIPIDELVDFRGLGKIEKAFVPLLDEVCAKHPSVIGCQKKRSRRFSEWAFTALGRVLHFLKTKKARDMDEEACSHLQILWEELETCRFNLTWLEPHVQSALGMKNYMERSDKVKSVKENVAALEMEMKKLKAMVASVEVDLEMARRELVKVEEGFEEIDLDGEVGYGP 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03079 340 Coils Coil 285 319 - -
Aip02g03079 340 SMART math_3 13 114 IPR002083 GO:0005515
Aip02g03079 340 SUPERFAMILY TRAF domain-like 13 135 - -
Aip02g03079 340 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 9 146 IPR008974 GO:0005515
Aip02g03079 340 ProSiteProfiles MATH/TRAF domain profile. 11 133 IPR002083 GO:0005515
Aip02g03079 340 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 324 - -
Aip02g03079 340 Pfam MATH domain 18 135 IPR002083 GO:0005515
Aip02g03079 340 CDD MATH 13 133 IPR002083 GO:0005515
Aip02g03079 340 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03079 Aip-Chr2 107372009 107373808 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03079 - - ahf:112729469 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03079 02 107372009 107373808 Aip02g03079 02 107372009 107373808 ECH
Aip02g03079 02 107372009 107373808 Aip07g00636 07 6058003 6070838 ECH
Aip02g03079 02 107372009 107373808 Aip06g03604 06 133440266 133442731 PCT