Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01884 ATGGCGTCGAGGCAACAATTCAAGGAAGATAGAGCTGAGGCAGCTGCAAAGCTTGCAGCCAAGGACATAGGCGATGTAAACAGAGAAAGAGAGCGTGACGAAGGTTACACGCTCAACTCCGAAAAGGCACGTGCTGAAGCCGCTGCAAAGCTTGCTGCCAAGGATCTTGAAGATGTGAACAGAGCAAGAGACACAGCTACTCTAGGTGTTTCGTACCACCAGCTACAGCAGCAGCAGCAGCAGCAAAACCCTGGTGTTGTAGGGTCCATGTTAAGGGCAGTGCACGACACTATCGAGCACGCAAAGGAAGCTGTGGTAGGGAAGACTCAGGAGACCGGAGAGGCGGTTAGCGACACTGCAAAATGTGTTTCTGAGAAGACAATGGAGACGAAGGACAAAGCAGGTACCAAAGTTGGAGAGTACGCTGGCTATGCTGCTGATAAAGCGAGAGAAACAAAAGATGTAACGATGAACAAGACTGATGCCAAGAACAAGACAATGGAGAAATCTGGCGCGTATAAGGATTATGCTGCGGATAAGGCAAAGGAAGCGAAAGACGCTACAATGCAGAAGGCTGGGGAGTATAAGGATTATGCTGCTGACAAGGCGAAGGAAGCGAAGGATGCTACAAAGCAAAAAGCTGGAGAGTACAAGGATTATGCTGCTGACAAGGCGACGGATGCAAAAGATTATGGTGCTGAGAAGGCAAAGGAAGCGAAAGACGCTACAGTGCAGAAGGCTGGAGAGTACTCAGAGTATACTGCGGAGAAGGCAAAAGAGGGGAAGGACACGACAATTGGGAAGCTTGGGGAGCTGAAAGACTCAGCTGCCGATGCTGCTAAGAGAGCTATGGATTTCTTCACCGGCAAGAAAGAGGAAACCAAGCAGAAGGCCGCAGAGACAACGGAAGCAGCCATGCAGAAGACTAATGAGGCAAAGGAGAAGCCGAGTGGAATAGAGGAAGAAGCAAGGAGAAAAATGGAAGGGATGAGGATGGAGGGAGGAGGAGGCACGGGCGGAGAGAGTAAGGTGTGGATCCGAGTGGAGGAGAGTCGACCTGGGGCGGCAGCAGATGCTTTAAAGGCAGCAGATGAGGCCTTGAATGATGCGGGGCGCCGCCGAGCCAACTCCCAGGGGACACCAAAGGAAGCCCCATCAAGGCGTGCCACGCCACTACACGCCCTCCTCTTTGTCACCAAGCAACCTTCGAAGGCGTGTAGCCTACCTCACATGCCCTCCACATGCCAACCTCTCCATCCACATGCCAACCTCTCCATGCATTGGCGTGCCATCCCCAACCATAGTGTGCACACGCCGGGCCAATGTCCAGGAGAGTCCTCAAGAAGCCCCATCATTGGCGTGCCATACCCAACCATAGTGTGCACACGCCGGGCCAATGCCCAGGAGAGTCTTCAAGAAGCCCCATCGAAGGTGTATAGCCTCCCTTCCATGTCCTCACACGCCAACCTAGCACCAAGGAGTCTCCTTCGAAGGAGTGCCATGCCCACTACACGTCCTTTACGCGCCAAGTAA 1533 0.531 MASRQQFKEDRAEAAAKLAAKDIGDVNRERERDEGYTLNSEKARAEAAAKLAAKDLEDVNRARDTATLGVSYHQLQQQQQQQNPGVVGSMLRAVHDTIEHAKEAVVGKTQETGEAVSDTAKCVSEKTMETKDKAGTKVGEYAGYAADKARETKDVTMNKTDAKNKTMEKSGAYKDYAADKAKEAKDATMQKAGEYKDYAADKAKEAKDATKQKAGEYKDYAADKATDAKDYGAEKAKEAKDATVQKAGEYSEYTAEKAKEGKDTTIGKLGELKDSAADAAKRAMDFFTGKKEETKQKAAETTEAAMQKTNEAKEKPSGIEEEARRKMEGMRMEGGGGTGGESKVWIRVEESRPGAAADALKAADEALNDAGRRRANSQGTPKEAPSRRATPLHALLFVTKQPSKACSLPHMPSTCQPLHPHANLSMHWRAIPNHSVHTPGQCPGESSRSPIIGVPYPTIVCTRRANAQESLQEAPSKVYSLPSMSSHANLAPRSLLRRSAMPTTRPLRAK 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01884 510 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 1 35 - -
Aip06g01884 510 Coils Coil 291 311 - -
Aip06g01884 510 PANTHER - 42 379 - -
Aip06g01884 510 MobiDBLite consensus disorder prediction 19 40 - -
Aip06g01884 510 Pfam Late embryogenesis abundant protein 229 272 IPR004238 -
Aip06g01884 510 Pfam Late embryogenesis abundant protein 161 195 IPR004238 -
Aip06g01884 510 Pfam Late embryogenesis abundant protein 123 160 IPR004238 -
Aip06g01884 510 Pfam Late embryogenesis abundant protein 196 231 IPR004238 -
Aip06g01884 510 Pfam Late embryogenesis abundant protein 252 289 IPR004238 -
Aip06g01884 510 PANTHER - 1 35 - -
Aip06g01884 510 MobiDBLite consensus disorder prediction 307 331 - -
Aip06g01884 510 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 42 379 - -
Aip06g01884 510 MobiDBLite consensus disorder prediction 490 510 - -
Aip06g01884 510 Gene3D - 232 288 - -
Aip06g01884 510 Gene3D - 158 202 - -
Aip06g01884 510 Coils Coil 42 62 - -
Aip06g01884 510 MobiDBLite consensus disorder prediction 291 343 - -
Aip06g01884 510 MobiDBLite consensus disorder prediction 19 41 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01884 - - aip:107648779 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01884 06 62888404 62890802 Aip06g01884 06 62888404 62890802 ECH
Aip06g01884 06 62888404 62890802 Aip02g03273 02 109519652 109521299 PCT