Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03273 ATGGAGTCAAGGGAACAATTGAAGGAAGAAAGAGCTGAACAAACTGCAAAAGATCTTGAAGAAGTTAACAAAGCTAGAAACCATGATCATGATGAACAACAACAACAAAAGCCAGGTGTAATTGGTTCAGTGCTAAGAGCAGTTCATGACACATATGAAAGTGCTAAAGATGTTGTTGTTGGCAAAAGGGACAACACTACTACAAATGCAGCATCATCAGATATAACTACAACAAATACAGGTGAAGAATTGGGAGGATTTGGTGCTGGTGAAGTCAGAGATATCTCTATTGGAAAAGCCAAGAATGCAAAAGGTTCTACAAAGGAACAAGCTGCTGAAAAGGGAAAAGAATCAAAAGATGCTACAATGGAAAAGGCAGGTGAATACACAGATTATGCATCACAGAAAGCAAAAGAAACAAAAGATGCTGCATCTCAAAAAGCAAAGGAAGCTAAAGATGCAACCATGGATAAGGCTAAGGAAGCCAAGGACAAGACAATGGAAAAGGGTGGTGAGTACAGAGATTATGCTTCGGAGAAGGCGAAGGAAGGGAAGGACACCACGGTGGGGAAGCTTGGGGAGCTGAAGGAGAGGGCGATGGGTTTCTTGGGAGGCAAGAAAGAAGAAACAAAGCAGAAGAGTGGAGAGACATTTGAAGCAACGAAGGACAAAGCTTATGATATGAAGGAAGCAACAAAGAACAAGGCTTCAGAAACTGCTGAGGCAGCAAAGCACAAAACCACCGAAGCTAAGGACAAGACCAAGGAAAACTTGAGCGGAGCAGAGGAAGAAGCAAGGAGGAAAATGGAAGAGCTTAAGGTGGAAGGTGGAGGAGGATACAACAGAGATCTGGAAACCGCCGCCGCCGCCGCCGGAGACAAGCCGTCTACGGTGAGATTGCAAAAGACGCGACCGGTTGCGGTGGCCGAAGCCTTGAAAGCATCTGATCAGATGACAGGACAGGCCTTCAACGACGTCGGACGGGTCGACGGCGACGATGAAGTTTCCAAGTAA 1014 0.4556 MESREQLKEERAEQTAKDLEEVNKARNHDHDEQQQQKPGVIGSVLRAVHDTYESAKDVVVGKRDNTTTNAASSDITTTNTGEELGGFGAGEVRDISIGKAKNAKGSTKEQAAEKGKESKDATMEKAGEYTDYASQKAKETKDAASQKAKEAKDATMDKAKEAKDKTMEKGGEYRDYASEKAKEGKDTTVGKLGELKERAMGFLGGKKEETKQKSGETFEATKDKAYDMKEATKNKASETAEAAKHKTTEAKDKTKENLSGAEEEARRKMEELKVEGGGGYNRDLETAAAAAGDKPSTVRLQKTRPVAVAEALKASDQMTGQAFNDVGRVDGDDEVSK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03273 337 Coils Coil 244 275 - -
Aip02g03273 337 MobiDBLite consensus disorder prediction 1 35 - -
Aip02g03273 337 MobiDBLite consensus disorder prediction 1 43 - -
Aip02g03273 337 PANTHER - 131 334 - -
Aip02g03273 337 MobiDBLite consensus disorder prediction 106 193 - -
Aip02g03273 337 MobiDBLite consensus disorder prediction 62 83 - -
Aip02g03273 337 MobiDBLite consensus disorder prediction 62 280 - -
Aip02g03273 337 PANTHER - 1 152 - -
Aip02g03273 337 MobiDBLite consensus disorder prediction 200 278 - -
Aip02g03273 337 Coils Coil 134 165 - -
Aip02g03273 337 Gene3D - 104 155 - -
Aip02g03273 337 Gene3D - 206 259 - -
Aip02g03273 337 Gene3D - 156 202 - -
Aip02g03273 337 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 1 152 - -
Aip02g03273 337 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 131 334 - -
Aip02g03273 337 Pfam Late embryogenesis abundant protein 135 161 IPR004238 -
Aip02g03273 337 Pfam Late embryogenesis abundant protein 152 195 IPR004238 -
Aip02g03273 337 Pfam Late embryogenesis abundant protein 108 151 IPR004238 -
Aip02g03273 337 Pfam Late embryogenesis abundant protein 219 260 IPR004238 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03273 Aip-Chr2 109519652 109521299 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03273 - - aip:107626431 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03273 02 109519652 109521299 Aip02g03273 02 109519652 109521299 ECH
Aip06g01884 06 62888404 62890802 Aip02g03273 02 109519652 109521299 PCT