LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip06g01756	ATGGGAGAGAAAACAGATCAGCCAAAGAATGACACGGAGAAGAAGACCGAAGGCGGAGGGAACAAAAACGACGCTCCCTCCCCTGTCGTATTGAAGCTAGACATGCATTGTGAGGGATGCGTTAAGAAAATCAAACGCGCCGTTCGCCACTTTGACGGTGTGGAAGACGTGAAGGCCGACATCTCCTCTAACAAACTAACCGTCTTCGGAAAAGTGGACCCCGCTAGTGTTCGAGACAGGCTGGCCGAGAAAACCAACAAGAAGGTCGAGCTCCTTTCCCCCCAGCCCAAGAAAGACTTCCCCGCCGCCGATAATAAACCGCCGCCGGAGAAGAAGTCCGATGACAAGAAACCGGAAGCCAAAAAGCCCGAAGAAAAAAAGCCTAAAGAGAGCACAGTGGCGTTGAAGATCAGATTGCACTGTGACGGTTGCATTCAGAAAATTCGCAAGATTATCCTCAAGGTCAAAGGAGTGGAATCGGTGAACATTGAAGAAGGGAAGGATTTGGTAACCGTTACGGGAACCATGGACGTGAAGGAAATGGTGCCGTTCCTGAACGAGAAGCTCAAGAGGAACGTTGAGGTGATGGGCCCACCCAAGAAAGAAGAAGATAAAAAAAACAAAGAAGGAGGAGGGGAAAAGAAAGGGAAGAAAGAAGGTGGTGGTGGTGGTGGCGGCGGAGGAGACGGCGGGAAGAAGGCGGTGGTGGAGGAAGGTGGGACCAAGGCAGTGGAAATTAACAGAATGGAGCACTCCGGTTACGGGTACCCACCTGCTCCTATGTATTGGTACGATGGGTATGGACCTGGTCAAACTAGTACTAGCTACGCGGTGGAGGTTAACCCTTCTTCATCAGGGGCCGGGTACCCTAATAATCAAGGGTACCCTTATGATTATTGGGGTTATGGAGGGAGCCATGATGTTAATCATCATAATAATCAAGGGTATACCGAGCCACCCCCTTATTACATGCACCCTCGTTATCCTGCTCCTCAGATGTTCAGCGACGAGAATCCCAATGCTTGTTCCCTCATGTGA	1038	0.5048	MGEKTDQPKNDTEKKTEGGGNKNDAPSPVVLKLDMHCEGCVKKIKRAVRHFDGVEDVKADISSNKLTVFGKVDPASVRDRLAEKTNKKVELLSPQPKKDFPAADNKPPPEKKSDDKKPEAKKPEEKKPKESTVALKIRLHCDGCIQKIRKIILKVKGVESVNIEEGKDLVTVTGTMDVKEMVPFLNEKLKRNVEVMGPPKKEEDKKNKEGGGEKKGKKEGGGGGGGGGDGGKKAVVEEGGTKAVEINRMEHSGYGYPPAPMYWYDGYGPGQTSTSYAVEVNPSSSGAGYPNNQGYPYDYWGYGGSHDVNHHNNQGYTEPPPYYMHPRYPAPQMFSDENPNACSLM	345

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip06g01756	345	PANTHER	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6	1	345	IPR044594	GO:0046872
	Aip06g01756	345	MobiDBLite	consensus disorder prediction	1	20	-	-
	Aip06g01756	345	SUPERFAMILY	HMA, heavy metal-associated domain	132	191	IPR036163	GO:0046872
	Aip06g01756	345	ProSiteProfiles	Heavy-metal-associated domain profile.	35	68	IPR006121	GO:0046872
	Aip06g01756	345	Pfam	Heavy-metal-associated domain	137	194	IPR006121	GO:0046872
	Aip06g01756	345	Pfam	Heavy-metal-associated domain	33	85	IPR006121	GO:0046872
	Aip06g01756	345	MobiDBLite	consensus disorder prediction	103	131	-	-
	Aip06g01756	345	ProSiteProfiles	Heavy-metal-associated domain profile.	139	202	IPR006121	GO:0046872
	Aip06g01756	345	MobiDBLite	consensus disorder prediction	92	131	-	-
	Aip06g01756	345	Gene3D	-	26	99	-	-
	Aip06g01756	345	Gene3D	-	129	202	-	-
	Aip06g01756	345	CDD	HMA	139	174	IPR006121	GO:0046872
	Aip06g01756	345	SUPERFAMILY	HMA, heavy metal-associated domain	30	91	IPR036163	GO:0046872
	Aip06g01756	345	MobiDBLite	consensus disorder prediction	193	235	-	-
	Aip06g01756	345	CDD	HMA	35	90	IPR006121	GO:0046872
	Aip06g01756	345	MobiDBLite	consensus disorder prediction	193	220	-	-
	Aip06g01756	345	PANTHER	HEAVY METAL-ASSOCIATED DOMAIN PROTEIN	1	345	-	-
	Aip06g01756	345	MobiDBLite	consensus disorder prediction	1	29	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip06g01756	Aip-Chr6	41619729	41622003	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip06g01756	-		-	gmx:100795652	363.999

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip06g01756	06	41619729	41622003	Aip06g01756	06	41619729	41622003	ECH
	Aip06g01756	06	41619729	41622003	Aip02g03330	02	110014966	110017168	PCT