Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03330 ATGGGAGAGAAGCAAAAGGAGCAGCCAAAGAATGAAACGGAGGAGAAGAAGCCGTCGTCTGAAGAACCAAAGAAAAACGACACACCCGCTCCTGTCGTTTACAAGCTTGACTTGCATTGCGAGGGATGTATTAAGAAAATCAAAAGAACCGTTCGCCATTTTGATGGTGTGGAGGATGTCAAGGCTGATTTAACGGCTAACAAGTTAACGGTCACCGGAAACGACGTTGACGCCGTTAAGCTTCAAGAGAAGCTTATCGTCAGAACTAAGAAGAAGGTTGAGCTACTAACTCCTCCGCCGCCCAAGAAGGAAGCCGCTCCTCCTCCTCCTGCTCCTCCGGCCGAGGGAGAAAAGAAATCCGATGAGAAGAAGCCACCTAAAGAGAGCACGGTGGTTTTGAAGATCAGATTGCACTGTGACGGTTGCATTACGAAAATTAGAAGAATCATCCAGAAGTTCAACGGTGTTGATTCGGTGAGCATTGATGGAGGTAAAGATTTGGTGACGGTGAAGGGAACCATGGATGTGAAGGAACTGGTGCCCTATTTGAACGACAAGCTCAAGAGGAACGTGGAGGTGGTTGCACCAAAGAAAGATGAGGAAAAGAAAGAAAAAGACGGCAGCGATGCCGGTGCCGGTGAAAAGAAAGAGAGCAAAGAAGCTGCCGGCGACAAAAAAGACGGCGGAGACAAAAAAGAAAGTGGAGGAGGAGGAGACGGTGACAAAAAAGAAAAAACAGCAGCGACGACAGCGACAACAACGACTGAAACAAAGAGTGAGGTTAACAAAATGGAATACCACGGATACCCATTGCCATCCCCAATTTATTGGCACAATAATAATGAAAATTTTCATCAAGGTCAAACAAGTTATGCTATGGAGGTTCACCCTGGGTATGCAAACCATGGGTACCACTATATGGAGCCACCACAAGGATACATGACCCATCATCATCAAGGGTATGTGATGAACCATAATCAAGGGTATCATCATGTTGAGCCAGGTCCATTACCATTCTACATGAACCCTAACCAACCTCACCCTCAGATGTTCAGTGATGAGAACCCTAATGCTTGTTCCCTCATGTGA 1089 0.4637 MGEKQKEQPKNETEEKKPSSEEPKKNDTPAPVVYKLDLHCEGCIKKIKRTVRHFDGVEDVKADLTANKLTVTGNDVDAVKLQEKLIVRTKKKVELLTPPPPKKEAAPPPPAPPAEGEKKSDEKKPPKESTVVLKIRLHCDGCITKIRRIIQKFNGVDSVSIDGGKDLVTVKGTMDVKELVPYLNDKLKRNVEVVAPKKDEEKKEKDGSDAGAGEKKESKEAAGDKKDGGDKKESGGGGDGDKKEKTAATTATTTTETKSEVNKMEYHGYPLPSPIYWHNNNENFHQGQTSYAMEVHPGYANHGYHYMEPPQGYMTHHHQGYVMNHNQGYHHVEPGPLPFYMNPNQPHPQMFSDENPNACSLM 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03330 362 CDD HMA 137 172 IPR006121 GO:0046872
Aip02g03330 362 ProSiteProfiles Heavy-metal-associated domain profile. 38 85 IPR006121 GO:0046872
Aip02g03330 362 Pfam Heavy-metal-associated domain 134 192 IPR006121 GO:0046872
Aip02g03330 362 Pfam Heavy-metal-associated domain 37 85 IPR006121 GO:0046872
Aip02g03330 362 MobiDBLite consensus disorder prediction 100 114 - -
Aip02g03330 362 Gene3D - 29 103 - -
Aip02g03330 362 Gene3D - 127 201 - -
Aip02g03330 362 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 1 362 IPR044594 GO:0046872
Aip02g03330 362 CDD HMA 38 94 IPR006121 GO:0046872
Aip02g03330 362 MobiDBLite consensus disorder prediction 1 24 - -
Aip02g03330 362 MobiDBLite consensus disorder prediction 115 129 - -
Aip02g03330 362 ProSiteProfiles Heavy-metal-associated domain profile. 137 212 IPR006121 GO:0046872
Aip02g03330 362 MobiDBLite consensus disorder prediction 92 129 - -
Aip02g03330 362 MobiDBLite consensus disorder prediction 197 246 - -
Aip02g03330 362 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 362 - -
Aip02g03330 362 SUPERFAMILY HMA, heavy metal-associated domain 129 185 IPR036163 GO:0046872
Aip02g03330 362 MobiDBLite consensus disorder prediction 1 32 - -
Aip02g03330 362 MobiDBLite consensus disorder prediction 197 263 - -
Aip02g03330 362 SUPERFAMILY HMA, heavy metal-associated domain 33 85 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03330 Aip-Chr2 110014966 110017168 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03330 - - aip:107626477 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03330 02 110014966 110017168 Aip02g03330 02 110014966 110017168 ECH
Aip06g01756 06 41619729 41622003 Aip02g03330 02 110014966 110017168 PCT