Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01577 ATGAAAGGCATTGATATCTTCTGCGCTTCACAATCCTCAACAGCCATATCTCATGCCATGGAACAAGCCTCCTCTTCTTCTTCTTCTTCCAACACCTTCCATCTCGGTGGCAGGGCCCTCGACCGCCACAACCCCATCATCATGGATTCTAGAAGAACACCTTCTAGAGACTTCACTCTCCCACCGACTCCCTCTTCCGTTGACCCCAAACCTGGCCACCATGATCTCCAAAAGGGTAAGAAAAAATCATCATCATCGTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTAAGAGAAGTTCAAGAAAGGGTCATGATAAGAAAAAGAGTGTGACAGAGAATAAGGTGACTGAACATTTTACCAACAATCACTCTTCAAAGGCCATTGATAGTGTTGTGAGAAGGAGTTGGGTCACTCCTGCTGGTTCATCAAGGTATCTGCTAAGTGACATATCAGATTATGATCCTGTTTTGGCTCTAAATACTTCTAATATTAATGTTGATGATGATAAAAAGAAGGGTCATCAAGTTGTTCATAATCAAGATGAAACAATAAAACATCATCATGCATCTAATTCTAAACCCTCCAGCTCCTCCTCTGCTCCAAAATCTGCTTCGTCAAACCAGGTTGTGGTATTAAGGGTTTCTCTACATTGCAAAGGTTGTGAAGGCAAAGTGAGGAAGCATCTCTCTAGAATGCAAGGAGTTACATCCTTCAACATAGATTTTGCGGCAAAGAAGGTGACAGTAGTTGGGGATGTGACTCCATTGAGTGTATTGGCAAGCATATCAAAGGTTAAGAATGCACAATTTTGGCCACCACCACCTTCTGGATCCGCTAGTAATCTAGAATCAAGAAAAAGAAACTTGGCCTAA 876 0.4212 MKGIDIFCASQSSTAISHAMEQASSSSSSSNTFHLGGRALDRHNPIIMDSRRTPSRDFTLPPTPSSVDPKPGHHDLQKGKKKSSSSSSSPSSSSSSSKRSSRKGHDKKKSVTENKVTEHFTNNHSSKAIDSVVRRSWVTPAGSSRYLLSDISDYDPVLALNTSNINVDDDKKKGHQVVHNQDETIKHHHASNSKPSSSSSAPKSASSNQVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPPPPSGSASNLESRKRNLA 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01577 291 Pfam Heavy-metal-associated domain 213 265 IPR006121 GO:0046872
Aip06g01577 291 SUPERFAMILY HMA, heavy metal-associated domain 209 266 IPR036163 GO:0046872
Aip06g01577 291 MobiDBLite consensus disorder prediction 17 123 - -
Aip06g01577 291 MobiDBLite consensus disorder prediction 183 207 - -
Aip06g01577 291 CDD HMA 212 265 IPR006121 GO:0046872
Aip06g01577 291 MobiDBLite consensus disorder prediction 82 98 - -
Aip06g01577 291 MobiDBLite consensus disorder prediction 17 35 - -
Aip06g01577 291 MobiDBLite consensus disorder prediction 191 207 - -
Aip06g01577 291 Gene3D - 206 270 - -
Aip06g01577 291 MobiDBLite consensus disorder prediction 274 291 - -
Aip06g01577 291 MobiDBLite consensus disorder prediction 271 291 - -
Aip06g01577 291 PANTHER COPPER CHAPERONE 1 282 - -
Aip06g01577 291 ProSiteProfiles Heavy-metal-associated domain profile. 209 266 IPR006121 GO:0046872
Aip06g01577 291 PANTHER OS08G0405700 PROTEIN 1 282 IPR044526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01577 Aip-Chr6 28923077 28925189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01577 - - gmx:100786319 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01577 06 28923077 28925189 Aip02g01317 02 30237075 30243814 PCT