Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01317 ATGTTCTGTGCTTCACAAGCCTCNNNNNNNNNNNNNNNNNNNATTTGTGCCATTTGTGCCGCCATGGATGAAGCCTCATGCTCTTCTTCCACCAACACCATTCAACTCGGAGGCAAAGCCATCGACCGCCACAACCCCATCATCTGCCATTCTAGAAGAGCAACCCTCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTCACCCACCAATCAACCCTCAGAAGAAAAGATCTTCTTCAAAACCATCATCAAGTAATGCAGAGAATAAGAACAAGAACAGTGCTAAAAAGGGTGGTCATCATGATCAGAAGAAGAAAAACGTAGCAGAAAATACTGTCTACTCTTCTAAGCAGATTGATAGCGTTCTGGCGAGGAGAAGTTGGATTAAGCAAAATAATAATAATGGTGATTTATTCACTACTACTCCTCCTGTTGGTTCAACAAGGTGTTTGCTCAGTGACACTGCTTTCTTCGATGATAACAATGATGGTGTATCAGATTTTCATGATCCAGCTTTGGTATTAAATAATAATAATAATAATAAAAAGGGTCAAGATGAAATTCAAACTGAAAACAACACTTTATCTAAACCTTCTACCTCTTCCCATCATCCCAAGTCTGCTTCTTCAGACCAGCAGGAAGTTGTCCTAAGGGTTTCTTTGCACTGCAAGGGTTGTGAAGGGAAAGTGAGGAAACATCTCTCCAAAATGCAAGGAGTTAGTTCCTTTAAAATAGATTTTGCTTCAAAGAAGGTGACAGTTGTTGGGGATTTGACTCCATTGAGTGTGTTGACAAGCATATCAAAAGTGAAGAGTGCACAATTTTGGTCAGCAACTACTGATTCAGCTGTTGGATCTAGTTATTATGGTACTTTAGAAACAAACAACAAATATGTTATCTAA 903 0.392 MFCASQAXXXXXXXICAICAAMDEASCSSSTNTIQLGGKAIDRHNPIICHSRRATLSSSSSSSSSSSHPPINPQKKRSSSKPSSSNAENKNKNSAKKGGHHDQKKKNVAENTVYSSKQIDSVLARRSWIKQNNNNGDLFTTTPPVGSTRCLLSDTAFFDDNNDGVSDFHDPALVLNNNNNNKKGQDEIQTENNTLSKPSTSSHHPKSASSDQQEVVLRVSLHCKGCEGKVRKHLSKMQGVSSFKIDFASKKVTVVGDLTPLSVLTSISKVKSAQFWSATTDSAVGSSYYGTLETNNKYVI 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01317 300 Gene3D - 209 274 - -
Aip02g01317 300 MobiDBLite consensus disorder prediction 168 211 - -
Aip02g01317 300 PANTHER COPPER CHAPERONE 1 285 - -
Aip02g01317 300 MobiDBLite consensus disorder prediction 51 92 - -
Aip02g01317 300 PANTHER OS08G0405700 PROTEIN 1 285 IPR044526 -
Aip02g01317 300 ProSiteProfiles Heavy-metal-associated domain profile. 220 273 IPR006121 GO:0046872
Aip02g01317 300 MobiDBLite consensus disorder prediction 49 113 - -
Aip02g01317 300 CDD HMA 216 269 IPR006121 GO:0046872
Aip02g01317 300 Pfam Heavy-metal-associated domain 217 263 IPR006121 GO:0046872
Aip02g01317 300 MobiDBLite consensus disorder prediction 172 211 - -
Aip02g01317 300 SUPERFAMILY HMA, heavy metal-associated domain 213 270 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01317 Aip-Chr2 30237075 30243814 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01317 - - aip:107625211 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01577 06 28923077 28925189 Aip02g01317 02 30237075 30243814 PCT