Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01537 ATGGTGGGAGTTATATCGTTGCTAACAGGGAGGGCTGGTCCAAGTGGCTTTGGATCAGCTTCAACAGCAGAGGAGGTTACTCATGGAATTGATGCCTCCAACCTCACTGCTATTATCACTGGAGGAGCAAGTGGCATTGGATTGGAGACAGCGAGAGTGCTGGCTCTGAGGAATGTACACGTCATCATTGGTGTACGGAATACAGTTAGTGCGAAGAAGGCGAAGGAAGAGATTGTTGAGCAGAAGCCGTCCGCCCGTGTTGACATTCTGAAGCTCGATTTGTGCTCTCTCACATCTGTTGCTTCTTTTGTCCACAACTTCCTTGCTCTTCATCTTCCTCTCAATATCTTAATAAACAATGCTGGAGTCATGTTCTGCCCTTTCAAGCTGTCAGAGAATGGGGTTGAAACGCAGTTTCATACTAACCATCTTGGACATTTCTTGTTGACAAACCTGCTCCTCGAGAAAATGAAACAAACTGCGGAAGCCACAGGAATTGAAGGGAGGATAATAAATTTGTCATCAATTGCCCACAACTACACTTACAGAAAGGGAATTAGATTTCAAAAGCTGAATGAACGGAAAGGTTATGATAACAAGAAGGCGTACGGCCAGTCCAAGTTATGCAACATACTGCACTCAAATGAGCTTTCTCGTCGCCTACAGGAAGAGGGTGTGAACATCACTGTTAACTCGGTCCACCCAGGAGTCATAATGACTCCTCTTATGAGACACTCTTCTTACCTGATGCATTTCCTGAAGATCTTCACCTTTTACATATGGAAGAACGTTCCACAGGGAGCAGCCACGACATGCTATGTTGCTCTGCACCCAAGCGTGAAAGGTGAAACTGGCAAGTACTTTGTGGATTGCAATAAGGTTAAACCAAGCAAATTTGCCTCAAACGAACAGCTTGGAAGGAAACTCTGGGATTTCAGTGAAAGACTCATCAATTCAATTTCTAAAGCTTAA 972 0.4455 MVGVISLLTGRAGPSGFGSASTAEEVTHGIDASNLTAIITGGASGIGLETARVLALRNVHVIIGVRNTVSAKKAKEEIVEQKPSARVDILKLDLCSLTSVASFVHNFLALHLPLNILINNAGVMFCPFKLSENGVETQFHTNHLGHFLLTNLLLEKMKQTAEATGIEGRIINLSSIAHNYTYRKGIRFQKLNERKGYDNKKAYGQSKLCNILHSNELSRRLQEEGVNITVNSVHPGVIMTPLMRHSSYLMHFLKIFTFYIWKNVPQGAATTCYVALHPSVKGETGKYFVDCNKVKPSKFASNEQLGRKLWDFSERLINSISKA 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01537 323 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 3 319 - -
Aip06g01537 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 295 IPR036291 -
Aip06g01537 323 CDD retinol-DH_like_SDR_c_like 36 310 - -
Aip06g01537 323 Pfam short chain dehydrogenase 36 182 IPR002347 -
Aip06g01537 323 PANTHER RETINOL DEHYDROGENASE 3 319 - -
Aip06g01537 323 PRINTS Glucose/ribitol dehydrogenase family signature 36 53 IPR002347 -
Aip06g01537 323 PRINTS Glucose/ribitol dehydrogenase family signature 112 123 IPR002347 -
Aip06g01537 323 PRINTS Glucose/ribitol dehydrogenase family signature 162 178 IPR002347 -
Aip06g01537 323 PRINTS Glucose/ribitol dehydrogenase family signature 226 243 IPR002347 -
Aip06g01537 323 Gene3D - 27 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01537 Aip-Chr6 27242272 27249645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01537 38 296 Acyl Lipid Metabolism Gene Families AT3G55290 25.092 8.52e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01537 K11153 - gmx:100781156 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01537 06 27242272 27249645 Aip06g01537 06 27242272 27249645 ECH
Aip06g01537 06 27242272 27249645 Aip02g01245 02 26916821 26927215 PCT