Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01481 ATGTGGAATTCTTTATGCGTGGCCAATGGCACTCTCTTCAACTCTTCTTCTCCACTTCTTCCTCTTCGTTTCAATTCTAACTCCAACCTTCGATTTCGCCGCGCCACAATCACAAGCATGTGCGTTCCTGAAAACGACGTCGTTGTGATCGGTTACGGAATGACTACAGTTGACTTCTTGGCCACCGTTGACTCTTTTCCGAAGCCCGACGACAAGGTCCGCACCACCTCCTTCAAGGTTCAAGGAGGTGGCAATGCCGGCAACGCCTTAACCTGCGCCGCAAGACTCGGCTTGAAGCCTAAGCTCATCTCCAAGGTCGGCGACGATTCCCAAGGCCATGCTATTCTCAACGAGCTTCAGCGCGACGCCGTCGACACCTCCTTTGTCCTGGTATCAAAGGGTGGTAGTTCCGCGTTTTCGTATGTTCTAATCGACAACCAGACAAAAACTCGGACTAGTATTTACACCCCTGCACATCCTCCCATGATGCCAGATGATCAATCCCAATCAACCTTATTATCTGCATTTAATGAAGCAAGATTAGTGTATTTTGATGGACTGACTACCGATACTGCTCTATTCATTGCACAAGAGGCCGCTCGAAATAAGATACCGATTTTAGTTGAGGCCGAATCACCTAAGGAAGGATTGGATGAGCTTCTGAAACTTGCTGACTTTGCTGTATGCTCTGCAAGGTTTCCTAAGGCTTGGACACATGCATCATCTATCCCAAGTGCACTGGTTTCCATGCTTTTAAGATTGCCAAATATCAAATTTGTGATTGTGACTTTGGGTGAAGATGGATGTCTAATGTTGGAAAGAAGTGCAAACGAGGATGCTGATACAGAAGAAAATGATATAGATTGTTTCTTTGAATCCTTATATGAAAGGAAGGATGATAGCTTGGCTGTCCCAACCTGTATATCGTCGGGGGTGAAAAAATTTAGAGCAAACGGAAGAGGGACAGTTTGTGGAAGATTCTTTCTTGGAACAGCAGAGAGGATACCGGATGGTGAGCTGATTGATACAACTGGTGCTGGAGATGCATTTATTGGTGCTATTCTTTATGCAATCTGCACAAACATGGAACCAGAGAAAATGTTACCATTTGCTGCTCAAGTGGCAGCTGCCAAGTGTAGGGCTTTGGGAGCTAGAACTGGTCTTCCATATCTGGCAGATCCACGCCTAGCAGCCTATTTATGCTAG 1206 0.4602 MWNSLCVANGTLFNSSSPLLPLRFNSNSNLRFRRATITSMCVPENDVVVIGYGMTTVDFLATVDSFPKPDDKVRTTSFKVQGGGNAGNALTCAARLGLKPKLISKVGDDSQGHAILNELQRDAVDTSFVLVSKGGSSAFSYVLIDNQTKTRTSIYTPAHPPMMPDDQSQSTLLSAFNEARLVYFDGLTTDTALFIAQEAARNKIPILVEAESPKEGLDELLKLADFAVCSARFPKAWTHASSIPSALVSMLLRLPNIKFVIVTLGEDGCLMLERSANEDADTEENDIDCFFESLYERKDDSLAVPTCISSGVKKFRANGRGTVCGRFFLGTAERIPDGELIDTTGAGDAFIGAILYAICTNMEPEKMLPFAAQVAAAKCRALGARTGLPYLADPRLAAYLC 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01481 401 PANTHER PFKB FAMILY CARBOHYDRATE KINASE 30 400 - -
Aip06g01481 401 PRINTS Ribokinase signature 51 72 IPR002139 GO:0016301
Aip06g01481 401 PRINTS Ribokinase signature 78 97 IPR002139 GO:0016301
Aip06g01481 401 PRINTS Ribokinase signature 260 271 IPR002139 GO:0016301
Aip06g01481 401 Gene3D - 47 386 IPR029056 -
Aip06g01481 401 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 30 400 - -
Aip06g01481 401 Pfam pfkB family carbohydrate kinase 46 276 IPR011611 -
Aip06g01481 401 Pfam pfkB family carbohydrate kinase 333 389 IPR011611 -
Aip06g01481 401 SUPERFAMILY Ribokinase-like 46 392 IPR029056 -
Aip06g01481 401 CDD ribokinase_group_B 48 390 - -
Aip06g01481 401 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 342 355 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01481 Aip-Chr6 24933751 24936907 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01481 - - gmx:100792838 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01481 06 24933751 24936907 Aip02g01154 02 23237304 23244408 PCT