Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01154 ATGCCCCACACTGCCGCGGTTTCGTCCTCGCGCGCCATCGCCAGTCGTCCTTGCATCCTTCTCTGCCACTTCATCTGCCGTTCGTGTAGGAAAGACAGCCACCATCGCGCTTCTACTTCACCCTCCTCGCGTCCCATCGCGACTCTCCATCGCTCGCTCGATGCACCCTTGCCGCTCGCGACTCCCCATCGCTCGCCACTCACACCCCACAACTCTCCATCTGTCGCGATGCAGCCATCACTAGGTCCCCATTCGCGACGCGCGATCAACTACTCCGATCCATGTTATCAAAATTCAAAACCGATTAAGGAAACGCCACGTGTCCTGAAATGGCCAAAAGTTGATCTTCCAAACATTGTGTTGTGGCCAAATGTCATTCAAGCTCATACTCTTTCTGGCGCTACTCGCTTCACTTCTTCCATCGCCATGTCCAACTCTCTCCTTCTTCTTCCTCCTTCTTCCTCTTCTTATTCTCAACCCCATTCACCTCTCACTCTCACTTTCTTTAATTCACGGAGGAAGAGACGCCCTTGCAGATATTCCAGAGCGACAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAAcTAATTTTAAGCTCTCTAGGCTGTTAGAAATGAAGAAATTTTGGACTTACTCACAACTATATGTGTTGTTCACTCAGGTTCAAGGAGGTGGAAATGCAGGCAATGCTTTAACTTGTGTTGCTAGATTGGGCCTCAAGCCAAGGATCATCTCCAAAGTAGCAGATGATAGTCAAGGCAGGAGCATACTAGATGAGTTACACGCTGATGGTGTAGATGCATCCTTTATTGTGGTGTCTAAGGAGGGAACTTCACCATTTACATATATTATTGTGGACAACGAAACGAAGACCCGTACTTGCATACATACCCCAGGATATCCTCCAATGATACCACAGGATCTTTCTGAATCAAGTCTGTTAACTGCATTGAATGGAGCAAACATTGTTTACTTTGATGGGAGGTTATATGAAACTGCTCTTGTTGTTGCCCAAGAGGCAGTTAGGAAGAATATACCCATCTTAATTGATGCAGAAAGGCCAAGGGAAGGGTTGGATGATCTCCTGAAATTTGCTAATTATGTTGTATGCTCAGCAAAGTTTCCACTAGCATGGACAGGAGCATCAACTATTCCACAAGCACTTGTTTCTATTCTCTTAAGATTGCCCAACATCAGATTTGTGATTGTGACCTTGGGAAAAGATGGTTGCATAATGCTTGAGAGAAATCTTGATGTGGCCTCTTCCACAGAGGAAGTGGATATAGACAGCTTAGTGGAGTCACTGAAGATGACAACAAATGAGAGTGTATTACACCCAACCTGTATATCATCGTCAGTGGCAACACTGAAGGCAGAAGGGATAGGAACAGTCAATGGGAGGATATATGTGGGAACAGCCGAGAGCATTCCTCCTTTGGAGCTTATTGACACCACTGGTGCCGGGGATGCATTTATTGGAGCTGTGATCTATGCTATCTGTGCCAACTTTTCGCCAGAGACAATGCTTTCCTTTGCTGCTAATGTGGCAGCTGCCAAGTGTCGAGATTTAGGAGCACGCAGTGGTCTTCCATATCGTGCTGACCCACGCATAGCTTCCTTCATGCAGTAG 1698 0.4405 MPHTAAVSSSRAIASRPCILLCHFICRSCRKDSHHRASTSPSSRPIATLHRSLDAPLPLATPHRSPLTPHNSPSVAMQPSLGPHSRRAINYSDPCYQNSKPIKETPRVLKWPKVDLPNIVLWPNVIQAHTLSGATRFTSSIAMSNSLLLLPPSSSSYSQPHSPLTLTFFNSRRKRRPCRYSRATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTNFKLSRLLEMKKFWTYSQLYVLFTQVQGGGNAGNALTCVARLGLKPRIISKVADDSQGRSILDELHADGVDASFIVVSKEGTSPFTYIIVDNETKTRTCIHTPGYPPMIPQDLSESSLLTALNGANIVYFDGRLYETALVVAQEAVRKNIPILIDAERPREGLDDLLKFANYVVCSAKFPLAWTGASTIPQALVSILLRLPNIRFVIVTLGKDGCIMLERNLDVASSTEEVDIDSLVESLKMTTNESVLHPTCISSSVATLKAEGIGTVNGRIYVGTAESIPPLELIDTTGAGDAFIGAVIYAICANFSPETMLSFAANVAAAKCRDLGARSGLPYRADPRIASFMQ 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01154 565 Pfam pfkB family carbohydrate kinase 478 553 IPR011611 -
Aip02g01154 565 Pfam pfkB family carbohydrate kinase 245 439 IPR011611 -
Aip02g01154 565 Gene3D - 234 550 IPR029056 -
Aip02g01154 565 MobiDBLite consensus disorder prediction 35 87 - -
Aip02g01154 565 CDD ribokinase_group_B 244 554 - -
Aip02g01154 565 MobiDBLite consensus disorder prediction 65 79 - -
Aip02g01154 565 SUPERFAMILY Ribokinase-like 244 555 IPR029056 -
Aip02g01154 565 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 506 519 IPR002173 GO:0016773
Aip02g01154 565 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 242 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01154 Aip-Chr2 23237304 23244408 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01154 - - gmx:100802550 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01154 02 23237304 23244408 Aip02g01154 02 23237304 23244408 ECH
Aip06g01481 06 24933751 24936907 Aip02g01154 02 23237304 23244408 PCT