Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01265 ATGGAAAGCAGCCAAGGGGAAAAAGAAAGCGCTTCTGCAGAAGCAGCTGTGTTTGAGGACTTGCTGCCGGTGATGGCAGAGAAGCTTGACGTGGACACTTTTGTGTCTGAGCTGTGTGGGGGTTTCAAGCTTCTGGCTGACCCCGAAAAGGGTTTGATCACGGCGGAGAGTCTGAAGAGGAACTCGGAGCTTCTGGGCATGGATGGGATGAGCAAAGAGGATGCAGAGGCTATGGTTAGACATGGTGATCTTGATGGGGATGGGAAGCTGAATGAAACTGAGTTTTGCATCCTGATGGTGAGGCTTAGCCCCGAAATGATGCAAGATGCTGAGGCATGGCTTCACAAAGCAATTCAACAAGAGCTCACCAAATCATCAACCTTGTAA 387 0.5013 MESSQGEKESASAEAAVFEDLLPVMAEKLDVDTFVSELCGGFKLLADPEKGLITAESLKRNSELLGMDGMSKEDAEAMVRHGDLDGDGKLNETEFCILMVRLSPEMMQDAEAWLHKAIQQELTKSSTL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01265 128 ProSiteProfiles EF-hand calcium-binding domain profile. 70 105 IPR002048 GO:0005509
Aip06g01265 128 ProSitePatterns EF-hand calcium-binding domain. 83 95 IPR018247 -
Aip06g01265 128 Pfam EF-hand domain pair 49 101 IPR002048 GO:0005509
Aip06g01265 128 SUPERFAMILY EF-hand 18 114 IPR011992 -
Aip06g01265 128 Gene3D - 16 127 - -
Aip06g01265 128 PANTHER CALCIUM-BINDING PROTEIN KIC 8 124 IPR044205 GO:0005509
Aip06g01265 128 PANTHER CALCIUM-BINDING PROTEIN KIC 8 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01265 Aip-Chr6 18993531 18994204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01265 7 122 EF-hand Containing Proteins AT2G46600 70.690 6.85e-58 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01265 K24345 - gmx:100787197 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01265 06 18993531 18994204 Aip02g00370 02 4984806 4985534 PCT