Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00370 ATGGAAACTAACACCAATAACATCATTAAGAGAAGAACTACAACCATGGATCAAGAATCAGACCAACAACAATTCGAGGACTTGCTTCCGGTCATGGCCGAGAAACTCGACGTGGAGACATTCGTCTCCGAACTTTGTGGGGGTTTTAAACTCCTAGCAGACCCTGAAAAGGGCGTGATCACGAGCGAGAGCCTGCGTAGGAACGCGGCTCTCCTCGGCATGGAAGGGATGAGCATGGAGGATGCTGAGGATATGGTAAGACAAGGTGATCTTGATGGTGATGGAAAATTGAATGAGACTGAGTTTTGTATACTTATGGTTAGGCTTAGCCCTGGCATGATGGAAGATGCTGAGTCATGGCTTGAAAAAGCAATTGAAGAAGAGCTAAGGAAATTCTCAACTTAA 405 0.4568 METNTNNIIKRRTTTMDQESDQQQFEDLLPVMAEKLDVETFVSELCGGFKLLADPEKGVITSESLRRNAALLGMEGMSMEDAEDMVRQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIEEELRKFST 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00370 134 ProSiteProfiles EF-hand calcium-binding domain profile. 77 112 IPR002048 GO:0005509
Aip02g00370 134 SUPERFAMILY EF-hand 30 132 IPR011992 -
Aip02g00370 134 Pfam EF-hand domain pair 56 108 IPR002048 GO:0005509
Aip02g00370 134 Gene3D - 22 133 - -
Aip02g00370 134 PANTHER CALCIUM-BINDING PROTEIN KIC 16 131 - -
Aip02g00370 134 ProSitePatterns EF-hand calcium-binding domain. 90 102 IPR018247 -
Aip02g00370 134 PANTHER CALCIUM-BINDING PROTEIN KIC 16 131 IPR044205 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00370 Aip-Chr2 4984806 4985534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00370 1 129 EF-hand Containing Proteins AT2G46600 65.116 2.38e-57 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00370 K24345 - gmx:100802677 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00370 02 4984806 4985534 Aip02g00370 02 4984806 4985534 ECH
Aip06g01265 06 18993531 18994204 Aip02g00370 02 4984806 4985534 PCT