Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01212 ATGTTGGAGAAAGTGGAAGAGTTCAACATGGAGAAGGTGATCCAAGAGTTTGAGACACTTACAAAAGATGCCGGAAGGGTTCAGAGGGAAACCCTCAAGAGGATTCTGGAGGATAATGCTTCAGCTGAGTATTTGCAAAATTTGGGTCTCAACGGAAGAACTGACCCTGAAAGTTTCAAGGCTTGTGTACCACTTGTTACCCACAAAGAATTGGAGCCTTATATACATAGAATCATTGATGGAGACACTTCTTCTATTCTCACTGGAAAACCTATCACTACTATGTCATTAAGCTCTGGCACTACTCAGGGGAAGCCAAAATATCTGCCATGGAATGATGAATTGTTTGAAACCACTATGCAGATATATCAGACCTCTTTTGCCTATAGGAATAGAGAGTTCCCTATCAAGAATGGGAAGGCTTTGAGCTTCATATACAGCAGCAAACAGTTCAAAACAAAAGGGGGTGTGGCAGCCGGAACTGCCACAACCAATGTGTTTCGCAATTCGCGGTACAAGCGGGAGATGAAGGCACTCCAATCCCAATGTTGCAGCCCAGATGAAGTGATATTCGGCCCTGACTTCTTTCAATCACTCTACTGCCACCTCTTATGTGGACTAATCTTCCATGAAGAAGTTCAGCTTGTTTCGTCCGTATTTGCACACAGCATTGTCCATGCTTTTAGAACATTCGAACAGGTATGGGAAGAGCTTTGCACTGATATCAAACAAGGTGTCCTCAGCAGCCGGATCACCGTTCCATCGATCCGAGCAGTCATGTCCAAGCTCCTAAAACCGAACCCAGAGCTTGCCAACCTGATCCATGCAAAATGTGTGGGATTGAGCAACTGGTATGGCCTAATACCAGAGCTTTTTCCTAATGCAAAGTATGTGTACGGAATAATGACAGGGTCAATGGAGCCATATTTGAAAAAGATGAGGCATTATGCTGGGGAGCTGCCATTGTTGACCGCTGACTATGGATCCTCTGAAGGGTGGATTGCTGCAAATGTGAACCCAAGACTTGCACCTGAATTTGCTACTTATGCTGTGCTTCCTCAAATTGGTTACTTTGAATTCATTCCACTCACACAGCTTGAAAATAATGATGCTTCTTCTTCATTCCTCTCTATTGATCTCAACCCAGTGGGCCTCACTGAGGTCAAGGTTGGTGAGGAGTACGAAATTGTCATCACCAATCCAGCAGGTTTATACAGGTATAGGCTAGGGGACGTTGTGAAGGTTATGGGATTCCATAACTCAAGTCCAGAACTGAAATTCGTTCGTCGGAGCAGTCTTCTTCTTACCATCAACATTGACAAGAACACCGAGGCGGATTTGCAGTTGGCGGTGGAAGCGGCGGGGAAAGTGTTGGCAGAGGAGAAACTAGAAGTAGTTGACTTCACCAGCCATGTTGACTTGTCAAAGGAGCCAGGGCATTATGTTATATTCTGGGAAATCAATGGAGAAGCTAGTGAACAAGTTCTTGGTGAATGCTGCAACTGTTTGGACAGGTCCTTTGTTGATGCAGGGTACACTAGCTCCCGCAAGGTCAACTGCATTGGGCCCCTCGAACTCCGACTTGTTAGGAGGGGAACATTCCAGAAGATTCTAGAACATTACCTTGGACTTGGAGCTACTGTTAGTCAGTATAAGACTCCAAGATGTGTAGGCCCTACAAACCCCACTGTCTTGCAAATCTTGACTGATAATGTTGTCAAAACCTATCTCAGTACTGCTTTCAATTGA 1749 0.4494 MLEKVEEFNMEKVIQEFETLTKDAGRVQRETLKRILEDNASAEYLQNLGLNGRTDPESFKACVPLVTHKELEPYIHRIIDGDTSSILTGKPITTMSLSSGTTQGKPKYLPWNDELFETTMQIYQTSFAYRNREFPIKNGKALSFIYSSKQFKTKGGVAAGTATTNVFRNSRYKREMKALQSQCCSPDEVIFGPDFFQSLYCHLLCGLIFHEEVQLVSSVFAHSIVHAFRTFEQVWEELCTDIKQGVLSSRITVPSIRAVMSKLLKPNPELANLIHAKCVGLSNWYGLIPELFPNAKYVYGIMTGSMEPYLKKMRHYAGELPLLTADYGSSEGWIAANVNPRLAPEFATYAVLPQIGYFEFIPLTQLENNDASSSFLSIDLNPVGLTEVKVGEEYEIVITNPAGLYRYRLGDVVKVMGFHNSSPELKFVRRSSLLLTINIDKNTEADLQLAVEAAGKVLAEEKLEVVDFTSHVDLSKEPGHYVIFWEINGEASEQVLGECCNCLDRSFVDAGYTSSRKVNCIGPLELRLVRRGTFQKILEHYLGLGATVSQYKTPRCVGPTNPTVLQILTDNVVKTYLSTAFN 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01212 582 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 582 - -
Aip06g01212 582 Coils Coil 10 30 - -
Aip06g01212 582 Pfam GH3 auxin-responsive promoter 16 557 IPR004993 -
Aip06g01212 582 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 582 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01212 Aip-Chr6 17755930 17759782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01212 14 579 EF-hand Containing Proteins AT1G23160 38.038 1.32e-137 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01212 K14506 - gmx:100794598 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01212 06 17755930 17759782 Aip02g00286 02 3802344 3808795 PCT