Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00286 ATGTTAGAGAAAGTTGAAGGTTTCAACATGGAGAAAGTAATAGAGGAATTTGAGGAAGTTACTAAGGATGCTGGTAGAGTTCAAATTGAAACTCTTAGGAAGATTCTTGAAGATAATTCAGAAGCTGAATACCTTCAGAATTTAGGACTTAATGGAAGAACTGATCCTCAGAGTTTCAAGAACTGTGTCCCACTTGTTACTCATAAAGAGCTTGAACCTTACATCAATAGAATGATTGATGGTGATCTTTCTTCAATCCTCACTTCAAAACCAATCACAACTATGTCTCTAAGCTCTGGAACTACTCAGGGGAAGCCAAAGTTTGTGCCATGGAATGATGAGCTTTTTGAGACCACAGTTCAGATATATAAAACCTCTTTTGCCTTTAGAAACAAAGAATTTCCAATCACAAGTGGAAAGGCCTTAAGCTTCATATACAGCAGCAAGCAATTCAAGACCAAAGGAGGGTTAGCAGCAGGAACAGCAACAACAAATGTTTTCAGAAATTCAAGATACACTGTTGCAATGCAAGCACTAAAATCACAATGTTGCAGCCCTGAAGAAGTGATATTTGGTCCTGATTTTCACCAATCACTCTATTGCCACCTACTTTGTGGCCTAATCTTCTGTGATGAGGTTCAATTTGTGTCCTCAACTTTTGCACACAGCATTGTCCATTCTTTTAGGACATTTGAGCAAGTTTGGGAGGATCTTGTTGCTGATATAAGGGATGGTGTCCTTACCGAAAGGGTCACTGTCCCTTCCTTGAGGAATGCTATGTCCAAAATTCTCAAGCCTGATCCCAATTTGGCTAACATCATCCAAACAAAAATCATGGGGTTAAGCAATTGGTATGGATTAATTCAAGAGCTATTTCCAAATGCAAAGTATGTGTATGGAATAATGACAGGGTCAATGGAGCCATATTTGAAGAAGTTAAGGCACTATGCTGGTGACCTACCACTGTTGACTTCTGATTATGGATCTTCAGAAGGTTGGATTGCTACAAATGTGAATCCAACATTGCCACCTGAGTCTGCCTTGTACACTGTTCTTCCTCAAATTGGATACTTTGAATTTATACCTCAAAATAAGGCAGACTCTGATTTCATTGATGTGGAACCTCAGCCTGTTGGACTCACTCAAGTTAAGGTTGGTCAAGAATATGAAATTGTTATCACCACTCCAGCAGGCTTGTACAGGTATCGACTCGGCGATATTGTTAAGGTTATGGGATTCTACAACTCATCGCCGCAACTAAAATTCGTCCGGCGGAGCAGCCTTCTACTTACAATCAACATAGACAAGAACACAGAGAAGGATCTTCAATTAGCTGTGGAAGAAGCATCAAAGTTTCTAGCTGAAGAAAAATTAGAAGTTGTTGATTACACAAGTTATGTTGATGTGTCCAAAGATCCAGGGCACTATGTTATAGTTTGGGAAATTAGTGGCGAAGCAAGTGAAGAAGTTCTTAGTGAATGTTGCAATTGCTTGGACAAATCCTTTGTTGATGCAGGGTATACTAGCTCTAGGAAGGTCAATTGCATCGGCGCCCTCGAACTCCGAGTCGTCCGGCACGGAACATTCCAGAAGATTCTAGAACATTATATAGGGTTAGGATCTGCTGTTAGTCAGTTCAAGACACCAAGGTGTGTAGGGTCTAACAATGCCAAAGTGTTGCAAATATTGAATGAGAATGTTGTGAACAAGTACTTTAGTTCTGCTTTCAATAATTGA 1737 0.399 MLEKVEGFNMEKVIEEFEEVTKDAGRVQIETLRKILEDNSEAEYLQNLGLNGRTDPQSFKNCVPLVTHKELEPYINRMIDGDLSSILTSKPITTMSLSSGTTQGKPKFVPWNDELFETTVQIYKTSFAFRNKEFPITSGKALSFIYSSKQFKTKGGLAAGTATTNVFRNSRYTVAMQALKSQCCSPEEVIFGPDFHQSLYCHLLCGLIFCDEVQFVSSTFAHSIVHSFRTFEQVWEDLVADIRDGVLTERVTVPSLRNAMSKILKPDPNLANIIQTKIMGLSNWYGLIQELFPNAKYVYGIMTGSMEPYLKKLRHYAGDLPLLTSDYGSSEGWIATNVNPTLPPESALYTVLPQIGYFEFIPQNKADSDFIDVEPQPVGLTQVKVGQEYEIVITTPAGLYRYRLGDIVKVMGFYNSSPQLKFVRRSSLLLTINIDKNTEKDLQLAVEEASKFLAEEKLEVVDYTSYVDVSKDPGHYVIVWEISGEASEEVLSECCNCLDKSFVDAGYTSSRKVNCIGALELRVVRHGTFQKILEHYIGLGSAVSQFKTPRCVGSNNAKVLQILNENVVNKYFSSAFNN 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00286 578 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 577 - -
Aip02g00286 578 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 577 IPR004993 -
Aip02g00286 578 Pfam GH3 auxin-responsive promoter 16 554 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00286 Aip-Chr2 3802344 3808795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00286 17 574 EF-hand Containing Proteins AT1G23160 37.871 3.27e-134 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00286 K14506 - gmx:100813492 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00286 02 3802344 3808795 Aip02g00286 02 3802344 3808795 ECH
Aip06g01212 06 17755930 17759782 Aip02g00286 02 3802344 3808795 PCT