Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01208 ATGGCATCGGAGACGAAGATCGTGAATCTGGCCGAGGAGGCCAAGCTAGCCAGAGAAGGCGTCAAGGCTGCTCCCAGCTATGCCTTCACCAGCATCTGCAAGTCCCTCGTCGCTGGTGGCGTCGCCGGAGGAGTATCACGAACAGCTGTTGCTCCACTTGAACGCCTGAAGATTTTGCTGCAGGTCCAGAATCCCCACAACATAAAATACAATGGAACAGTTCAAGGTCTAAAATATATATGGAGGACTGAAGGTTTTCGTGGACTCTTCAAAGGGAATGGAACTAATTGTGCTCGAATTGTCCCCAATTCTGCAGTAAAGTTCTTCAGTTATGAGCAAGCTTCGAAAGCTATACTGCAGCTGTATCAGCAGAAAACTGGAAATGAGGATGCTCAGCTGACTCCTGTGTTACGTCTTGGAGCTGGAGCATGTGCTGGAATAATTGCCATGTCCGCAACTTATCCAATGGATATGGTTCGAGGCAGGATAACTGTACAGACAGAGAAGTCCCCTTACCAGTACAGAGGGATGTTCCATGCTTTGACAACTGTGCTTAGGGAAGAAGGCCCACGTGCTTTATATAAGGGTTGGCTTCCTTCAGTCATTGGAGTTGTTCCATATGTAGGTCTAAACTTTGCTGTTTATGAGTCTTTGAAAGATTGGTTAGTTAAATCCAATCCATTTGGTCTAGTGCAAGATTCTGAGTTGAGTGTGACAACTCGCCTGGCATGTGGTGCTGCAGCTGGAACTGTTGGGCAAACTGTTGCTTATCCCCTTGATGTCATTCGTCGAAGAATGCAGATGGTGGGGTGGAACCATGCTGCCTCTGTTGTAGCTGGCGATGGAAGAGTAAAGGCCCCACTTGAATATACTGGCATGGTTGATGCATTTAGGAAAACTGTTCGGTATGAAGGAGTTGGTGCATTATACAAGGGTCTGGTTCCCAATTCTGTAAAGGTCGTCCCATCCATAGCAATTGCATTTGTAACATATGAGGTGGTGAAGGACGTTTTAGGAGTGGAGTTCAGAATATCAGACTGA 1041 0.4678 MASETKIVNLAEEAKLAREGVKAAPSYAFTSICKSLVAGGVAGGVSRTAVAPLERLKILLQVQNPHNIKYNGTVQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKAILQLYQQKTGNEDAQLTPVLRLGAGACAGIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFHALTTVLREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLVKSNPFGLVQDSELSVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWNHAASVVAGDGRVKAPLEYTGMVDAFRKTVRYEGVGALYKGLVPNSVKVVPSIAIAFVTYEVVKDVLGVEFRISD 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01208 346 PRINTS Mitochondrial carrier protein signature 35 48 IPR002067 GO:0055085
Aip06g01208 346 PRINTS Mitochondrial carrier protein signature 48 62 IPR002067 GO:0055085
Aip06g01208 346 PRINTS Mitochondrial carrier protein signature 92 112 IPR002067 GO:0055085
Aip06g01208 346 PRINTS Mitochondrial carrier protein signature 148 166 IPR002067 GO:0055085
Aip06g01208 346 PRINTS Mitochondrial carrier protein signature 194 212 IPR002067 GO:0055085
Aip06g01208 346 PRINTS Mitochondrial carrier protein signature 245 267 IPR002067 GO:0055085
Aip06g01208 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 133 221 IPR018108 -
Aip06g01208 346 PANTHER BNAA09G39370D PROTEIN 4 341 - -
Aip06g01208 346 Pfam Mitochondrial carrier protein 235 338 IPR018108 -
Aip06g01208 346 Pfam Mitochondrial carrier protein 31 118 IPR018108 -
Aip06g01208 346 Pfam Mitochondrial carrier protein 133 225 IPR018108 -
Aip06g01208 346 SUPERFAMILY Mitochondrial carrier 31 333 IPR023395 -
Aip06g01208 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 30 117 IPR018108 -
Aip06g01208 346 Gene3D Mitochondrial carrier domain 28 340 IPR023395 -
Aip06g01208 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 236 337 IPR018108 -
Aip06g01208 346 PANTHER SOLUTE CARRIER FAMILY 25 4 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01208 Aip-Chr6 17639015 17642237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01208 36 341 EF-hand Containing Proteins AT5G51050 38.762 2.32e-67 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01208 K14684 - gmx:100777048 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01208 06 17639015 17642237 Aip02g00285 02 3759068 3762797 PCT