Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00285 ATGCCAGAATCCATCATAACCCTCCTTCCCAAAGTGCTAAGCCGTTTGGCAACAGTGAAATTGTTCTTACCAATTACAAGTAGAGATAGCAAATGGGTTGTAACACCTACTCTGGCTGAGGAAGCTAAGCTCGCTAGTCGTGAAGGCGTTGTCACCGCCGCCGCCGCTCCTTCCTACGCCTTCACCACCATCTGCAAGTCCCTTATCGCCGGTGGAGTCGCCGGAGGAGTATCACGAACAGCAGTTGCCCCACTGGAACGGTTGAAGATTTTGCTACAGGTCCAGAATCCTCATAACATTAAATACAATGGAACAGTCCAAGGCCTGAAATATATATGGAGAACTGAAGGTTTTCGTGGACTGTTCAAAGGGAATGGTACTAATTGTGCTCGGATTGTCCCTAACTCTGCAGTGAAGTTCTTCAGTTATGAGCAAGCTTCTAAGGGTATCCTGTATATGTATAGGCAGCAAACTGGAAATGAGGATGCTCAGCTGACTCCTGTTTTACGACTTGGAGCTGGAGCATGTGCTGGAATAATTGCCATGTCTGCAACTTATCCAATGGATATGGTTCGAGGCAGGATAACTGTACAGACTGAGAAATCCCCTTATCAGTATAGAGGAATGTTCCATGCTCTGTCTACCGTACTTAGGGAAGAAGGTCCACGTGCTTTATACAAGGGTTGGCTACCTTCAGTAATTGGAGTTATTCCTTATGTGGGTCTCAACTTTGCTGTCTACGAGTCTTTAAAAGATTGGTTAATCAAATCCAAACCGTTTGGTCTAGCTCAAGATTCTGAGTTGAGTGTGACAACACGTCTGGCTTGTGGTGCTGTTGCCGGAACTTTTGGACAAACTGTTGCTTATCCTCTCGACGTCATTCGTCGAAGAATGCAGATGGTGGGCTGGAACCATGCTGCTTCTGTTGTAGCTGGGGACGGAAGAGGCAAGGTCCCGCTCGAATACACTGGAATGATAGATGCATTTAGGAAAACCGTTCGGTACGAGGGATTTGGTGCATTATACAAGGGTCTGGTGCCAAATTCTGTAAAGGTGGTGCCGTCCATAGCAATCGCATTTGTAACGTACGAGGCAAGGGGATGCAGAGATGATAGATCATAG 1122 0.467 MPESIITLLPKVLSRLATVKLFLPITSRDSKWVVTPTLAEEAKLASREGVVTAAAAPSYAFTTICKSLIAGGVAGGVSRTAVAPLERLKILLQVQNPHNIKYNGTVQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYMYRQQTGNEDAQLTPVLRLGAGACAGIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFHALSTVLREEGPRALYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKPFGLAQDSELSVTTRLACGAVAGTFGQTVAYPLDVIRRRMQMVGWNHAASVVAGDGRGKVPLEYTGMIDAFRKTVRYEGFGALYKGLVPNSVKVVPSIAIAFVTYEARGCRDDRS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00285 373 Pfam Mitochondrial carrier protein 165 257 IPR018108 -
Aip02g00285 373 Pfam Mitochondrial carrier protein 64 149 IPR018108 -
Aip02g00285 373 Pfam Mitochondrial carrier protein 267 364 IPR018108 -
Aip02g00285 373 PANTHER SOLUTE CARRIER FAMILY 25 29 365 - -
Aip02g00285 373 SUPERFAMILY Mitochondrial carrier 64 364 IPR023395 -
Aip02g00285 373 Gene3D Mitochondrial carrier domain 60 367 IPR023395 -
Aip02g00285 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 268 369 IPR018108 -
Aip02g00285 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 62 149 IPR018108 -
Aip02g00285 373 PRINTS Mitochondrial carrier protein signature 67 80 IPR002067 GO:0055085
Aip02g00285 373 PRINTS Mitochondrial carrier protein signature 80 94 IPR002067 GO:0055085
Aip02g00285 373 PRINTS Mitochondrial carrier protein signature 124 144 IPR002067 GO:0055085
Aip02g00285 373 PRINTS Mitochondrial carrier protein signature 180 198 IPR002067 GO:0055085
Aip02g00285 373 PRINTS Mitochondrial carrier protein signature 277 299 IPR002067 GO:0055085
Aip02g00285 373 PRINTS Mitochondrial carrier protein signature 226 244 IPR002067 GO:0055085
Aip02g00285 373 PANTHER BNAA09G39370D PROTEIN 29 365 - -
Aip02g00285 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 165 253 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00285 Aip-Chr2 3759068 3762797 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00285 68 365 EF-hand Containing Proteins AT5G51050 40.468 1.02e-66 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00285 K14684 - gmx:100777048 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00285 02 3759068 3762797 Aip02g00285 02 3759068 3762797 ECH
Aip06g01208 06 17639015 17642237 Aip02g00285 02 3759068 3762797 PCT