Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00973 ATGTCCACCAACCCCATCACCCAACAGATCGCCATGTCGGAGCTCGCCCAAGACGTCCTCGCCATCAACGCCGCCGCCAACAACGGCCCCAGACTGGGGCCCACGGTCACCGACCCTCAGTTCCTCTTCTCATGCGCGCCTTCCTCCTTGGTCCAGAAAGGTCTGCCCAACAAGGTTGAAGGCGTTCTTGGGCTGGGCCACGGGCCCATTTCCCTCCCTAACCAACTCGCATCACACTTTGGTTTGCAGCGCCAATTTACACTTTGCCTTTCTCGCAACCCAACCTCCACGGGGGCTGTACTATTTGGAAACCCACAAAAGCTTTTCGGTTACACTAACAACAAATTCGATCTTTCACGTGATCTTCTTTACACTCCACTAACCGTCAGTCCGCAAGGAGAGTACTACATGGAAATCAGCTCCATTAGAATCAACGGCCACTCCGTCTTCCCAGTGACTCCTTCGTCGTCTTCATTATTGTCATCGTCGTTGTATTCTCCGAGTGGTATGCTTGGGGCTACTCTGATTTCAACCACAGCACCTTACATGGTTCTGCACCACACCATATTCGAAACGTTCAGGCACGTTTTCGTGAAACAGTTTCCCATGCAGGGGCAGGTGAACGCGGTGGCGCCGTTCGGGTTGTGTTACGATTCAAAGAGGATAAACAACGCAAAACCTCCTAGCGTGGATATGGTGGTGAAGGTGGAGAAGAGCCGCCGTGAGGTTTCGTGGAGTATCTCCGGCGATAACTTAATGGTGCAGGCGCGGCCAGGGGTGACGTGTTTGGGGGTCGTGAATGGAGGGACGAGTCCTAGAGCAGCCATAGCCATAGGGACACGTCAGCTGGAGGAGAAGGTGGTGGTGTTCGACCTGGTGAAGTCGAGAGTGGGGTTGAGCTCTTCCCTATGCTCACGCGGGAGGAGCTGTTCTGACCTCTTCGGCTTCTCTAACAAATCATAG 963 0.54 MSTNPITQQIAMSELAQDVLAINAAANNGPRLGPTVTDPQFLFSCAPSSLVQKGLPNKVEGVLGLGHGPISLPNQLASHFGLQRQFTLCLSRNPTSTGAVLFGNPQKLFGYTNNKFDLSRDLLYTPLTVSPQGEYYMEISSIRINGHSVFPVTPSSSSLLSSSLYSPSGMLGATLISTTAPYMVLHHTIFETFRHVFVKQFPMQGQVNAVAPFGLCYDSKRINNAKPPSVDMVVKVEKSRREVSWSISGDNLMVQARPGVTCLGVVNGGTSPRAAIAIGTRQLEEKVVVFDLVKSRVGLSSSLCSRGRSCSDLFGFSNKS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00973 320 ProSiteProfiles Peptidase family A1 domain profile. 1 300 IPR033121 -
Aip06g00973 320 Gene3D Acid Proteases 1 104 IPR021109 -
Aip06g00973 320 Pfam Xylanase inhibitor N-terminal 9 104 IPR032861 -
Aip06g00973 320 Gene3D Acid Proteases 105 319 IPR021109 -
Aip06g00973 320 Pfam Xylanase inhibitor C-terminal 134 300 IPR032799 -
Aip06g00973 320 SUPERFAMILY Acid proteases 4 309 IPR021109 -
Aip06g00973 320 PANTHER ASPARTYL PROTEASE-RELATED 1 314 IPR001461 GO:0004190|GO:0006508
Aip06g00973 320 PANTHER BASIC 7S GLOBULIN 1 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00973 Aip-Chr6 13788450 13789412 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00973 - - aip:107645877 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00227 06 2410415 2412106 Aip06g00973 06 13788450 13789412 ECH
Aip02g02803 02 104018976 104020648 Aip06g00973 06 13788450 13789412 ECH
Aip06g00973 06 13788450 13789412 Aip06g00973 06 13788450 13789412 ECH