Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00227 ATGGCACAAAAACTCTTGGCAGCTTTCCTCCTCCTCCTCTTCTCCGCCGCCATCACCGTCTCTTCAGCTCAGAAATCATTCAGACCAAAAGCATTGGTGATCCCAATCAAGAAGGACACTTCCACAAATCAGTACCTCACAACAATCCGGCAGCGCACCCCTCTCGTCCCCGTCTCCCTCGTCCTCGACCTCGGCGGCCAGTTTCTCTGGGTCGACTGCGACAAAAACTACGTCTCCTCCACCTACCGCCCCGCCCGCTGCGGCTCCGCCCAGTGCTCCCTCGCCGGCTCCACCTCCTGCGGCACCTGCAACTCCCCTCCCCGCCCAGGATGCAACAACAACACCTGCGGCCTCATACCGGACAACACCATCACCCACACCGCCACCGGCGGCGAGCTCGCGGAAGACGCCGTGTCCGTACAATCCACTAACGGCTTCAATCCAGGCCAAAACGTCACCGTTTCGCGCTTCCTCTTCTCCTGCGCCCCAACTTTCCTCCTCAAAGGCCTCGCTAGCGGCGTCTCCGGCATGGCGGGTCTCGGAAGGACGAAAATCGCACTTCCCACGCAGTTCGCCTCCGCTTTCAGCTTCGCCAGAAAATTCGCCGTTTGCTTATCCTCAAACGGCGTCGTTTTCTTCGGAGATGGACCGTACGGTTTCCTCCCGAACGTCGAGTACGATTCGAAATCCCTAACCTACACACCTCTCTTCATCAACCCCGTGAGCACCGCCTCCGCTTACTCCCAAGGAGAACCCTCCGCTGAGTACTTCATCGGCGTGAGTTCCATTAAAGTTGACCAAAACGTGGTCAAAGTCAAATCCAGCTTGTTGACCATCAACAAGACCAGCGGCGTGGGTGGAACCAAGATCAGCACTGTAAACCCTTACACGGTTCTAGAAGATTCGATCTTCAACGCCTTGGTTAAGTCCTTCGTGAATGCCTCGGCTGCAAGGAACATAACAAGGGTGGCTTCGGTGAAGCCGTTCGGAGCATGCTTCAGCACGGAGAACGTGTTCAGCACGCGCTTCGGGTACGCGGTTCCAACAATCGAGCTTGTTCTTGAAAACGCGAAATTGAGTTGGAGCATATTCGGTGCTAACTCGGTGGTTCAAGTGAGTGATAAAGTGATATGTCTTGGGTTCGTGAACGGTGGGAAGAACCCTAGAACCTCCATCGTGATCGGAGGGTATCAGTTAGAGAACAATCTTTTGCAGTTCGATCTGGCTGCTTCCAGATTGGGATTCAGTTCTTTGCTCTTTGGAAGACAAACCACGTGTTCCAACTTCAATTTCACCTCCACCGCTTAA 1308 0.5474 MAQKLLAAFLLLLFSAAITVSSAQKSFRPKALVIPIKKDTSTNQYLTTIRQRTPLVPVSLVLDLGGQFLWVDCDKNYVSSTYRPARCGSAQCSLAGSTSCGTCNSPPRPGCNNNTCGLIPDNTITHTATGGELAEDAVSVQSTNGFNPGQNVTVSRFLFSCAPTFLLKGLASGVSGMAGLGRTKIALPTQFASAFSFARKFAVCLSSNGVVFFGDGPYGFLPNVEYDSKSLTYTPLFINPVSTASAYSQGEPSAEYFIGVSSIKVDQNVVKVKSSLLTINKTSGVGGTKISTVNPYTVLEDSIFNALVKSFVNASAARNITRVASVKPFGACFSTENVFSTRFGYAVPTIELVLENAKLSWSIFGANSVVQVSDKVICLGFVNGGKNPRTSIVIGGYQLENNLLQFDLAASRLGFSSLLFGRQTTCSNFNFTSTA 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00227 435 Gene3D Acid Proteases 29 215 IPR021109 -
Aip06g00227 435 PANTHER ASPARTYL PROTEASE-RELATED 8 435 IPR001461 GO:0004190|GO:0006508
Aip06g00227 435 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 8 435 - -
Aip06g00227 435 SUPERFAMILY Acid proteases 37 426 IPR021109 -
Aip06g00227 435 Gene3D Acid Proteases 216 433 IPR021109 -
Aip06g00227 435 ProSiteProfiles Peptidase family A1 domain profile. 45 416 IPR033121 -
Aip06g00227 435 Pfam Xylanase inhibitor C-terminal 255 416 IPR032799 -
Aip06g00227 435 Pfam Xylanase inhibitor N-terminal 45 215 IPR032861 -
Aip06g00227 435 CDD xylanase_inhibitor_I_like 51 419 IPR033868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00227 Aip-Chr6 2410415 2412106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00227 18 417 Miscellaneous Gene Families AT1G44130 22.042 1.49e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00227 - - gmx:100797018 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00227 06 2410415 2412106 Aip06g00973 06 13788450 13789412 ECH
Aip06g00227 06 2410415 2412106 Aip06g00227 06 2410415 2412106 ECH