Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00758 ATGGAGGTTAGGAGGGGAAGTAAAACGTTGTCCTTAACCAGCACCATTCTCTTACAAGCGAGTGTTCTTCTCTCAACTTCCCGAATTCAATTTTCATCACTCGCTTCGCATCTTCAGCTTGACAAATGGCCACCGAGACCTTCCTTTTCACTTCCGAATCTGTCAACGAGGGTCACCCTGACAAGCTCTGCGACCAGGTCTCTGATGCAGTTCTCGATGCCTGCCTCCAGCAGGATCCCGATAGCCAATGTAGACTATGAGAAGATTGTCCGTGACACTTGCCGCAACATTGGATTTGTCTCTGATGATGTCGGTCTTGATGCTGACAAATGCAAGGTCTTGGTCAACATTGAGCAGCAGAGCCCCGATATTGCACAGGGTGTCCATGGCCACTTTACCAAGCGCCCAGAGGAGGTTGGTGCTGGTGACCAGGGTCACATGTTTGGTTATGCCACTGATGAAACCCCGGAACTCATGCCTCTCAGCCATGTCCTTGCAACAAAACTTGGCGCCCGCCTCACCGAGGTTAGGAAGAATGGTACATGTGCTTGGCTGAGACCAGATGGTAAGACTCAAGTAACTGTTGAGTACTACAATGACAATGGTGCCATGGTCCCAGTTCGCGTCCACACTGTCCTTATTTCCACCCAGCATGATGAGACTGTTACCAATGACCAAATTGCTGCTGATCTTAAGGAGCATGTTATCAAGCCTGTCATTCCTGAGAAGTACCTTGATGACAGGACCATCTTCCACCTTAACCCTTCTGGCCGCTTTGTCATTGGTGGCCCTCATGGTGATGCCGGTCTCACTGGAAGAAAGATCATCATTGATACTTATGGTGGCTGGGGTGCTCATGGTGGTGGTGCTTTCTCTGGAAAGGACCCTACCAAGGTCGACAGAAGCGGTGCCTATATCGTAAGGCAGGCAGCAAAGAGTATTGTGGCTAGCGGTCTTGCCCGCAGGTGTCTTGTTCAGGTTTCCTATGCCATTGGTGTCCCTGAGCCCTTGTCAGTCTTTGTTGAGTCTTATGGAACTGGGAAGATCCCTGACAAGGAGATCCTTCAAATTGTGAAGGAGAACTTCGACTTCAGGCCCGGAATGATCACCATTAACTTGGACCTCAAGAGGGGTGGCAACAGGTTCTTGAAGACAGCTGCTTATGGACACTTCGGAAGGGATGACGCCGATTTCACCTGGGAAATTGTGAAGCCACTCAAGTGGGACAAGCCTCAAGCATGA 1242 0.5016 MEVRRGSKTLSLTSTILLQASVLLSTSRIQFSSLASHLQLDKWPPRPSFSLPNLSTRVTLTSSATRSLMQFSMPASSRIPIANVDYEKIVRDTCRNIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDDRTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCLVQVSYAIGVPEPLSVFVESYGTGKIPDKEILQIVKENFDFRPGMITINLDLKRGGNRFLKTAAYGHFGRDDADFTWEIVKPLKWDKPQA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00758 413 Gene3D - 161 263 - -
Aip06g00758 413 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 1 81 412 - -
Aip06g00758 413 TIGRFAM metK: methionine adenosyltransferase 82 406 IPR002133 GO:0004478|GO:0005524|GO:0006556
Aip06g00758 413 Gene3D - 138 401 - -
Aip06g00758 413 SUPERFAMILY S-adenosylmethionine synthetase 136 260 IPR022636 GO:0004478|GO:0006556
Aip06g00758 413 Gene3D - 82 300 - -
Aip06g00758 413 SUPERFAMILY S-adenosylmethionine synthetase 261 408 IPR022636 GO:0004478|GO:0006556
Aip06g00758 413 CDD S-AdoMet_synt 82 401 - -
Aip06g00758 413 SUPERFAMILY S-adenosylmethionine synthetase 82 130 IPR022636 GO:0004478|GO:0006556
Aip06g00758 413 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 81 412 IPR002133 GO:0004478|GO:0005524|GO:0006556
Aip06g00758 413 Pfam S-adenosylmethionine synthetase, C-terminal domain 261 401 IPR022630 GO:0004478|GO:0006556
Aip06g00758 413 Pfam S-adenosylmethionine synthetase, central domain 138 259 IPR022629 GO:0004478|GO:0006556
Aip06g00758 413 ProSitePatterns S-adenosylmethionine synthase signature 1. 140 150 IPR022631 GO:0004478|GO:0006556
Aip06g00758 413 ProSitePatterns S-adenosylmethionine synthase signature 2. 287 295 IPR022631 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00758 Aip-Chr6 10126433 10129671 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00758 K00789 - gmx:100812341 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00758 06 10126433 10129671 Aip06g00758 06 10126433 10129671 ECH
Aip01g02326 01 121623649 121625798 Aip06g00758 06 10126433 10129671 ECH