Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02326 ATGGCAGCAGAGACTTTCCTTTTCACCTCCGAGTCGGTGAACGAGGGACACCCAGACAAGCTCTGTGATCAAATCTCCGATGCTGTCCTTGACGCCTGCCTCGAGCAGGACCCAGACAGCAAGGTTGCCTGTGAAACCTGCACCAAGACCAACATGGTCATGGTCTTTGGAGAGATTACAACTAAGGCCAATGTAGACTACGAGAAGATTGTCCGCGACACCTGCAGGAACATTGGATTCGTTTCCAACGATGTTGGTCTTGATGCTGACAACTGCAAGGTTCTTGTCAACATTGAGCAACAGAGCCCTGATATTGCACAGGGTGTCCATGGCCATCTCACAAAAAGGCCCGAGGAGATTGGTGCTGGTGACCAAGGTCACATGTTTGGCTATGCCACTGATGAGACCCCTGAGTTGATGCCCTTGAGCCATGTTCTTGCAACCAAGCTTGGCGCAAAACTCACCGAGGTTCGCAAGAACGGCACATGCCCCTGGTTGAGGCCCGACGGCAAGACCCAGGTCACAGTTGAGTATGTCAATGACAAGGGTGCCATGGTTCCCATCCGTGTCCACACCGTGCTTATCTCAACTCAGCACGATGAGACCGTCACCAACGATGAAATTGCCGCAGATCTCAAGGAGCATGTTATCAAGCCTGTGATCCCGGAGAAGTACCTGGACGAGAAGACCATCTTCCACTTGAACCCCTCAGGCCGATTCGTCATTGGTGGGCCTCATGGTGACGCAGGTCTCACTGGCCGCAAGATTATCATCGATACCTACGGTGGATGGGGAGCACACGGTGGTGGTGCCTTCTCGGGAAAGGACCCAACCAAGGTAGACAGGAGTGGAGCCTACATTGTGAGGCAGGCTGCCAAGAGCATTGTTGCCAGCGGACTTGCCAGGAGGTGCATTGTGCAAGTGTCCTATGCCATCGGTGTGCCAGAGCCATTATCTGTGTTTGTTGATACCTATGGAACTGGGAAGATCCCTGACAAGGAGATCCTCCAGATTGTGAAGGAGAACTTTGACTTCAGGCCAGGAATGATCTCAATCAACCTTGATCTAAAGAGAGGTGGCAACAACAGGTTCTTGAAGACTGCTGCTTATGGACACTTTGGAAGGGATGACTCTGACTTCACATGGGAGGTTGTGAAGCCCCTCAAGTGGGAGAAGGCCTAA 1182 0.5228 MAAETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRNIGFVSNDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYVNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKENFDFRPGMISINLDLKRGGNNRFLKTAAYGHFGRDDSDFTWEVVKPLKWEKA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02326 393 ProSitePatterns S-adenosylmethionine synthase signature 2. 268 276 IPR022631 GO:0004478|GO:0006556
Aip01g02326 393 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 3 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Aip01g02326 393 ProSitePatterns S-adenosylmethionine synthase signature 1. 121 131 IPR022631 GO:0004478|GO:0006556
Aip01g02326 393 PIRSF MAT 1 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Aip01g02326 393 SUPERFAMILY S-adenosylmethionine synthetase 5 111 IPR022636 GO:0004478|GO:0006556
Aip01g02326 393 Gene3D - 13 281 - -
Aip01g02326 393 TIGRFAM metK: methionine adenosyltransferase 7 388 IPR002133 GO:0004478|GO:0005524|GO:0006556
Aip01g02326 393 Pfam S-adenosylmethionine synthetase, C-terminal domain 242 383 IPR022630 GO:0004478|GO:0006556
Aip01g02326 393 CDD S-AdoMet_synt 7 386 - -
Aip01g02326 393 SUPERFAMILY S-adenosylmethionine synthetase 117 241 IPR022636 GO:0004478|GO:0006556
Aip01g02326 393 Hamap S-adenosylmethionine synthase [metK]. 4 392 IPR002133 GO:0004478|GO:0005524|GO:0006556
Aip01g02326 393 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 1 3 393 - -
Aip01g02326 393 Gene3D - 6 244 - -
Aip01g02326 393 SUPERFAMILY S-adenosylmethionine synthetase 242 390 IPR022636 GO:0004478|GO:0006556
Aip01g02326 393 Gene3D - 119 383 - -
Aip01g02326 393 Pfam S-adenosylmethionine synthetase, N-terminal domain 6 103 IPR022628 GO:0004478|GO:0006556
Aip01g02326 393 Pfam S-adenosylmethionine synthetase, central domain 119 240 IPR022629 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02326 Aip-Chr1 121623649 121625798 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02326 K00789 - gmx:100799139 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02326 01 121623649 121625798 Aip01g02326 01 121623649 121625798 ECH
Aip01g02326 01 121623649 121625798 Aip06g00758 06 10126433 10129671 ECH