Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00569 ATGCCAATATCTGAAGTCTCTAGTGATCTTACTATTGAAGTAGGAGACTCAAGCTTTCCACTTCACAAGTTTCCTCTAGTTTCTAGGAGTGGAAGAATCAGAAAACTGCTGCTAGAAGCAAAAGATTCCAAGGTTTCACGCATAAGTCTCCAAAATGTGCCTGGTGGTATAGATGCATTTGAGCTAGCAGCTAAATTCTGCTATGGAATAAATGTTGAATTCACTCTCTCAAACGTTGCCAAGCTACGTTGCATAGCGCATTTTCTAGAAATGACTGAAGAATTTGCTGAGAAGAACTTGGAGACTAGAGCGGAATCATATCTAAAAGAGTCAGTGCTACCAAGCATACAAAACAGCATTAGTGTTCTTCACCATTGTGAGACTCTTCTCCCAATTTCAGAAGACATTAACCTTGTTAGCAGGTTAATCAATTCAGTTGCAAACAATGCATGCAAACAACAACTTACCTCTGGATTGCTAAAACTTGATCATACTTTAAATTCTAAGACAATTTCAAACATGGAACCAGAAACTCCCTCGGATTGGTGGGGGAAATCTTTCAATGTTCTTGGCCTTGATTTTTTCCAGAGAGTAATTTCTGTGTTGAAATCAAAGGGGCTAAAACAAGATATGATCAGTAAGATTTTGATAAACTATGCACATAGTTCACTACAGGGGATTGCTCTTATTAGGGATCCTCAAGTTGTTAAAGGGAGTTTACCTGACTTGGAAGTAAAGAAAAAACAAAGGCTGGTCGTTGAAGCCATAGTTGGATTACTCCCTAATCAATCAAGGAAGAGCCAGGTTCCAATGGCATTCTTATCATTCCTGTTGAAGGCTGCTATCGCGGCTGGGGCCCCAACTTCTTGCAGGTGTGATTTGGAGAGGCGAATCGGCCTACAACTCGACCAGGCAATCCTAGAAGACATACTAATTCCGGCTAACTCGCTTCAGAACACACACAGCACAATATATGACACAGATTCAATCTTGAGGATTTTCTCAGTTTTCCTTAACCTTGATGAGGAGGACGATGATGATGATAATGATGGTGGCTGCTTCAGAGATGAAAGCCAAATGGTGTATGACTTCGACAGCCCCGGATCTCCAAAACAAAGCTCAATCCTCAAGGTATCTAAACTGATGGACAACTATCTTGCTGAAGTAGCATTAGACTCAAACTTGTTACCATCAAAATTCACAGCACTTGCAGAACTACTCCCAGATCATGCACGCATAGTGAGTGATGGACTCTACAGAGCAGTTGATATCTTCCTTAAGGTTCATCCAAATATAAAGGATTCAGAGAGGTACCGGTTATGCAAAAGCATAGATTGCCAGAAACTGTCTCAAGAAGCATGCAGCCATGCAGCACAGAACGAGAGGCTGCCGGTGCAAATGGCGGTTCAAGTGCTTTACTTCGAGCAAATGAGACTGCGAAACGCGATGAACGGCGGAGGACACCACCACAGCAACAGCTTCTTGTTCGGCGGCCATTTCCCTCAGCGGACGGGAAGCGGTGCCGGAAGCGGCGCCATTTCGCCGAGGGATAACTACGCGTCGGTTCGACGGGAGAATCGAGAGCTGAAGCTGGAGGTAGCGAGAATGAGGATGAGGCTGACTGATTTGGAGAAAGACCATGTTTCCATGAAACAGGAGCTTGTGAAGTCACAATACCCCGCTAACAAGCTTTTCAAATCTTTCACGAAGAAACTAAGCAAACTCAATTCTCTCTTTCGTTTAAGCACTAGTACTTTTAAGCAATCATCATTTGGTGCCAGTAATAATAATGCCAAAGGTATCGCTCATTCAGAAACTCATCGCTTTCCTTTTCCAAAAAGAAGACGCCACTCAGTTTCATGA 1863 0.4305 MPISEVSSDLTIEVGDSSFPLHKFPLVSRSGRIRKLLLEAKDSKVSRISLQNVPGGIDAFELAAKFCYGINVEFTLSNVAKLRCIAHFLEMTEEFAEKNLETRAESYLKESVLPSIQNSISVLHHCETLLPISEDINLVSRLINSVANNACKQQLTSGLLKLDHTLNSKTISNMEPETPSDWWGKSFNVLGLDFFQRVISVLKSKGLKQDMISKILINYAHSSLQGIALIRDPQVVKGSLPDLEVKKKQRLVVEAIVGLLPNQSRKSQVPMAFLSFLLKAAIAAGAPTSCRCDLERRIGLQLDQAILEDILIPANSLQNTHSTIYDTDSILRIFSVFLNLDEEDDDDDNDGGCFRDESQMVYDFDSPGSPKQSSILKVSKLMDNYLAEVALDSNLLPSKFTALAELLPDHARIVSDGLYRAVDIFLKVHPNIKDSERYRLCKSIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQMRLRNAMNGGGHHHSNSFLFGGHFPQRTGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVKSQYPANKLFKSFTKKLSKLNSLFRLSTSTFKQSSFGASNNNAKGIAHSETHRFPFPKRRRHSVS 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00569 620 Pfam BTB/POZ domain 6 110 IPR000210 GO:0005515
Aip06g00569 620 MobiDBLite consensus disorder prediction 590 620 - -
Aip06g00569 620 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 3 583 - -
Aip06g00569 620 SMART BTB_4 8 100 IPR000210 GO:0005515
Aip06g00569 620 Gene3D Potassium Channel Kv1.1; Chain A 3 115 IPR011333 -
Aip06g00569 620 PANTHER OS12G0117600 PROTEIN 3 583 IPR043454 -
Aip06g00569 620 ProSiteProfiles BTB domain profile. 8 76 IPR000210 GO:0005515
Aip06g00569 620 SUPERFAMILY POZ domain 4 93 IPR011333 -
Aip06g00569 620 Coils Coil 519 553 - -
Aip06g00569 620 Pfam NPH3 family 181 454 IPR027356 -
Aip06g00569 620 ProSiteProfiles NPH3 domain profile. 181 478 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00569 Aip-Chr6 7469642 7472334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00569 2 428 EF-hand Containing Proteins AT2G47860 58.590 5.34e-173 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00569 - - ahf:112695833 1173.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00569 06 7469642 7472334 Aip06g00569 06 7469642 7472334 ECH
Aip06g00569 06 7469642 7472334 Aip02g02896 02 105271203 105275068 PCT