Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02896 ATGGGAGTGGTAACAGTTGGTGAATTGAAGCCTAGCATTTCAGGAAAAAGAACCTTCCGTCCAAGTTCAAGCATAAGGCATGCCACTGAATGGCCAATTTCTGATGTATCTAGTGATTTTACAATTGAAGTTGGATCTTCAAGCTTTGCACTTCACAAGTTTCCTCTGGTTTCTAAGAGTGGAAGAATAAGGAAACTGCTGTTAGAGGCTAAAGACTCGAAGGTTTCGCGCATAAGTCTGGCGAACGTGCCGGGCGGCCTAGAATCGTTCGAGCTAGCTGCGAAATTCTGCTATGGAATCAATCTTGAATTAACACTCTCCAATGTTGCTATTCTAAAATGTGTATCACACTTTCTTGAAATGACAGAGGAGTATGCAGAGAAGAACTTGGAAACAAGAGTTGAATCATATCTAAAGGATACCGTTCTACCTAACACATCAAGCACCATAACCGTGCTTCATCGCTGCGAAACTCTTCTTCCATACTCAGAAGAGATCAACCTTGTTAGCAGGCTAATCAACGCGATTGCGAATAATGCATGTAAAGAACAGCTTACCTCTGGATTGTTGAAATTGGATCATAACTTCCCTTCCAAGACTATTTCTAGCATGGAACCGGAGACGCCGTCGGATTGGTGGGGGAAGTCTCTCAATATTCTTAGCCTTGAATTCTTCCAGAGAGTTCTGACGGCCGTGAAGTCGAAGGGACTAAAACAAGAAATGATCAGCAAGATCTTGATAAATTACGCGCACAATTCGCTTCAGGGGATTGTTAGTATTAGCAAGGATCCTCAATTTTTCAAGGGAAGTTCATCTGACTTGGAGTTGCAAAAGAGACAGAGGATAATTGTGGAAGCCATTGTTAGCTTGCTGCCTACGCAATCAAGGAAAAGTCCCGTTCCAATGGCGTTTCTATCCAGTTTGTTGAAGGCTGCAATTGCTGTGTTCGCTTCTTCGTCGTGCAGATCCGATCTGGAGAGAAGGATTGGCCTACAGCTTGATCAGGCAATCCTTGAAGACATACTAATTCCGACAAATTCGCAGCAAAATTTGCAGAACACAGCAATAATGTATGACATAGATTCAATTGTGAGGATATTTTCCATTTTCTTGAACTTGGATGAGGAGGAGGAGGATGATAATCGAATGCGAGACGAAAGCGAAATGGTTTATGACTATGACAGTCCTGGATCTCCAAAACAAAGCTCAATTATTAAGGTCTCAAAATTGCTGGACAATTTTCTAACCGAAGTAGCACTCGATCCAAACTTGTCACCATCCAAGTTTATATCGCTTGCAGAGCTACTTCCAGATCACGCCAGAGTAGTTAGTGATGGACTCTATAGAGCTGTTGATATCTTCCTTAAGGTTCATCCAAACATAAAGGACTCAGATCGATACCGTCTTTGCAAGGCCATTGATTGTCAGAAACTGACTCAAGAAGCATGCAGCCATGCAGCGCAAAACGAAAGGCTGCCGGTACAAATGGCGGTTCAAGTTCTTTACTTCGAGCAAATCCGGCTGCGAAACGCAATGAACGGAGGACACAACCAGATCTTCTTCGGCGGAGGATTCAACGGCCAGTTCCCTCAACGCTCGGGGAGCGGAGCAGGAAGCGGAGCCATTTCTCCGCGAGACAACTACGCTTCGGTGCGAAGAGAGAACCGGGAGCTGAAGCTGGAGGTTGCGAGAATGCGAATGAGGCTAACTGATTTGGAGAAAGATCACGTTTCAATGAAGCAGGGGCTTGTAAAGACACGCTCTGCAAGCAGGCTATTCAAATCATTGTCAAGAAAACTTAGCAAAATTAATATTCTATTTAGGATATCTAGCATTAAGCCAAATGGTGCTAGTTCAGAAAGCAGATTCCCTTTCCCTAGGAGAAGGCGTCACTCAGTTTCATGA 1905 0.4394 MGVVTVGELKPSISGKRTFRPSSSIRHATEWPISDVSSDFTIEVGSSSFALHKFPLVSKSGRIRKLLLEAKDSKVSRISLANVPGGLESFELAAKFCYGINLELTLSNVAILKCVSHFLEMTEEYAEKNLETRVESYLKDTVLPNTSSTITVLHRCETLLPYSEEINLVSRLINAIANNACKEQLTSGLLKLDHNFPSKTISSMEPETPSDWWGKSLNILSLEFFQRVLTAVKSKGLKQEMISKILINYAHNSLQGIVSISKDPQFFKGSSSDLELQKRQRIIVEAIVSLLPTQSRKSPVPMAFLSSLLKAAIAVFASSSCRSDLERRIGLQLDQAILEDILIPTNSQQNLQNTAIMYDIDSIVRIFSIFLNLDEEEEDDNRMRDESEMVYDYDSPGSPKQSSIIKVSKLLDNFLTEVALDPNLSPSKFISLAELLPDHARVVSDGLYRAVDIFLKVHPNIKDSDRYRLCKAIDCQKLTQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNQIFFGGGFNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQGLVKTRSASRLFKSLSRKLSKINILFRISSIKPNGASSESRFPFPRRRRHSVS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02896 634 ProSiteProfiles NPH3 domain profile. 211 507 IPR027356 -
Aip02g02896 634 Gene3D Potassium Channel Kv1.1; Chain A 24 146 IPR011333 -
Aip02g02896 634 SUPERFAMILY POZ domain 22 123 IPR011333 -
Aip02g02896 634 Coils Coil 548 575 - -
Aip02g02896 634 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 627 - -
Aip02g02896 634 Pfam NPH3 family 211 483 IPR027356 -
Aip02g02896 634 MobiDBLite consensus disorder prediction 615 634 - -
Aip02g02896 634 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Aip02g02896 634 PANTHER OS12G0117600 PROTEIN 25 627 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02896 Aip-Chr2 105271203 105275068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02896 1 457 EF-hand Containing Proteins AT2G47860 59.509 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02896 - - gmx:100814622 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02896 02 105271203 105275068 Aip02g02896 02 105271203 105275068 ECH
Aip06g00569 06 7469642 7472334 Aip02g02896 02 105271203 105275068 PCT