Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00409 ATGTCCAGTGCCACAAAAGTTTTGGATCCAGCATTCCAGGGAGCGGGTCAAAAAGCTGGAACTGAAATATGGAGGATTGAGAATTTTCAGCCAGTTCCATTGCCCAAATCAGAGTATGGAAAATTCTATATGGGAGATTCTTACATCATCTTGCAGACAACACAAGGCAAAGGAGGCACTTATTTTTATGATATTCACTTTTGGATTGGAAAGGATACAAGTCAAGATGAGGCTGGAACAGCTGCCATTAAAACTATTGAACTTGATGCATCTCTTGGAGGACGTGCTGTGCAGCACAGGGAAATCCAAGGGCATGAATCTGACAAATTTTTGTCATATTTTAAGCCATGTATAATACCATTAGAAGGGGGTGTTGCATCTGGATTTAAAAAACCTGAAGAGGAGGAGTTCGAAACACGTTTATATGTATGTAAAGGAAAACGTGTTGTCAGAATGAAACAGGTCCCTTTTGCACGGTCTTCACTGAACCATGATGATGTATTCATCCTAGACTCACAGAATAAGATTTATCAATTCAATGGAGCTAATTCAAATATTCAGGAAAGAGCCAAGGCTTTGGAAGTTATCCAGTATCTGAAGGAAAAGTATCATGAAGGGAAGTGTAATGTTGCCATTGTTGATGATGGAAAGTTGGACACTGAGTCAGACTCAGGTGAATTTTGGGTTCTCTTTGGTGGTTTTGCTCCAATTGGAAAGAAAGTAGTTAGTGATGATGATATCATTCCTGAGACAACTCCTGCCCAACTCTTTAGTATCGCTGATGGTGAGGTCAAGCCTGTAGAAGGTGAACTTTCTAAATCACTGCTGGACAACAGCAAATGCTATTTATTGGACTGTGGTGCTGAGGTATTCATCTGGGTTGGCCGGGTCACACAAGTTGAAGAGCGAAAAGCAGCTTGTCTTGCAGCTGAGGATTTTCTTACAAGCCAGAAACGACCAAAATCTACAAGGATAACCAGGGTCATTCAAGGTTATGAACCACATTCATTTAAGTCTAACTTTGACTCTTGGCCATCAGGATCCTCTAATACTGGTGCTGAGGATGGAAGAGGAAAAGTTGCAGCTTTGCTGAAGCAACAAGGAATCGGTGTCAAAGGAATGACAAAAAGTGCCCCAGTAAATGAGGAAATTCCGCCTTTGCTTGAAGGAGGTGGAAAGTTGGAGGTTTGGCAAATCAATAGGAGTGCTAAAACTCCATTACCTAAGGAGGATATTGGTAAATTTTATAGTGGCGATTGTTACATAGTACTGTACACTTATCACTCTGGCGAAAGGAAGGAAGATTATTACTTGTGCTGTTGGTTTGGCAAAGACAGCATTGAGGAGGACCAAAGAATGGCATCTCGTTTGGCCAATACAATGTTCAGCTCATTAAAGGGTAGACCTGTTCAGGGTCGCATATTTGAAGGTAAAGAGCCACCCCAGTTTGTTGCTCTTTTCCAACCTATGGTGGTTCTCAAGGGAGGTTTGAGCTCAGGTTACAAAAAATTAGTAGCAGATAAAGGCTTGCAAGATGAGACATACACAGCAGAGAGTGTCGCACTTATTCGAATTTCTAGAACTGCCATACATAATAACAATGCAGTGCAAGTTGATGCAGTGGCAGCGTCATTGAATTCTGCTGAGTGTTTTGTCCTTCAATCTGGCTCAACAATGTTCACTTGGCATGGCAATCAATCCTCCTTTGAGCAGCAGCAGCTAGCAGCGAAAGTTGCGGAGTTTCTAAAGCCTGGAGTTGCTTTAAAGCATGCTAAAGAAGGAACAGAAAGCTCAGCTTTCTGGTTTGCTCTTGGAGGAAAACAGAGTTACACCAGCAAAAAAGTCAACAATGACATTATCAGAGAACCACATTTGTTTAGTTTCTCTTTTAATAGAGGAAAGTTTCAGGTAGAGGAGGTGTACAACTTTTCCCAAGATGATTTGTTAACAGAGGACATCCTCATACTAGACACGCATGCAGAAGTGTTTGTTTGGATTGGCCAGTCTGTGGACCCAAAAGAAAAACAAAATGCTTTTGAAATTGGCCAGAGCTATATAGATAAGGCTGTATCACTGGAGGGACTATCTCCTCGGGTACCGCTATATAAAGTAACAGAAGGGAATGAACCATGCTTTTTCACAACATACTTTCCATGGGACCATGCTAAAGCTATGGTTCAGGGGAACTCTTTCCAGAAAAAGGTGACATTACTCTTCGGGATTCGCCATGCTGTAGAGGAAAAGTCTAATGGGCCAAGTCAAGGGGGACCAAGACAAAGAGCTGAAGCTTTGGCTGCCTTGTCTAATGCCTTTAATTCATCTTCTGATATGACATCCAGTATGTCACAGGATAGATTGAATGGGCTGAATCAAGGAGGACCAAGACAAAGAGCAGAAGCTTTGGCTGCTTTAAACTCTGCATTTAAATCATCATCCGGAACCAAAAGTTCTAGCCCTAAGACAACTGGAAGAAGTCAAGGATCACAAAGAGCAGCAGCAGTAGCTGCTCTCTCTCAAGTTCTTACTGCTGAGAAGAAGAAACAATCACCTGATTCTTCTCCTGTGGCAACCAGAAGTCCTGTCGTGGAAACTAGCACTTCTGATGCTAAAAGTGAAAGCGCCCCTTCCGAAACAGAAGGTCCTGAAGAAGTTGCTGAAGTCAAGGAGACAGAAGAACCTGCTCCTGGAACAGGTAGCAATGGGAATTCAGAACCAAAGCAAGAAAGTGTGGAAGATAGCAATGATACTCAAAATAGCCAGACTGTGTTCAGTTATGAGCAGTTAAAGGCTAAATCTGGTAGTCATCTGTCTGGAATTGATCTTAAACGCAGAGAGGCCTATCTGGCGGATAATGAATTTGGAACTGTATTTGGAATGACAAAAGAAGCATTCTATAAATTGCCAAGATGGAAGCAAGACATGCTGAAAAAGAAACATGAGTTGTTTTAG 2949 0.4198 MSSATKVLDPAFQGAGQKAGTEIWRIENFQPVPLPKSEYGKFYMGDSYIILQTTQGKGGTYFYDIHFWIGKDTSQDEAGTAAIKTIELDASLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEEFETRLYVCKGKRVVRMKQVPFARSSLNHDDVFILDSQNKIYQFNGANSNIQERAKALEVIQYLKEKYHEGKCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVVSDDDIIPETTPAQLFSIADGEVKPVEGELSKSLLDNSKCYLLDCGAEVFIWVGRVTQVEERKAACLAAEDFLTSQKRPKSTRITRVIQGYEPHSFKSNFDSWPSGSSNTGAEDGRGKVAALLKQQGIGVKGMTKSAPVNEEIPPLLEGGGKLEVWQINRSAKTPLPKEDIGKFYSGDCYIVLYTYHSGERKEDYYLCCWFGKDSIEEDQRMASRLANTMFSSLKGRPVQGRIFEGKEPPQFVALFQPMVVLKGGLSSGYKKLVADKGLQDETYTAESVALIRISRTAIHNNNAVQVDAVAASLNSAECFVLQSGSTMFTWHGNQSSFEQQQLAAKVAEFLKPGVALKHAKEGTESSAFWFALGGKQSYTSKKVNNDIIREPHLFSFSFNRGKFQVEEVYNFSQDDLLTEDILILDTHAEVFVWIGQSVDPKEKQNAFEIGQSYIDKAVSLEGLSPRVPLYKVTEGNEPCFFTTYFPWDHAKAMVQGNSFQKKVTLLFGIRHAVEEKSNGPSQGGPRQRAEALAALSNAFNSSSDMTSSMSQDRLNGLNQGGPRQRAEALAALNSAFKSSSGTKSSSPKTTGRSQGSQRAAAVAALSQVLTAEKKKQSPDSSPVATRSPVVETSTSDAKSESAPSETEGPEEVAEVKETEEPAPGTGSNGNSEPKQESVEDSNDTQNSQTVFSYEQLKAKSGSHLSGIDLKRREAYLADNEFGTVFGMTKEAFYKLPRWKQDMLKKKHELF 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00409 982 Pfam Villin headpiece domain 947 982 IPR003128 GO:0003779|GO:0007010
Aip06g00409 982 Gene3D Severin 133 245 IPR029006 -
Aip06g00409 982 CDD gelsolin_S6_like 622 719 - -
Aip06g00409 982 Gene3D Severin 617 735 IPR029006 -
Aip06g00409 982 Gene3D Severin 519 613 IPR029006 -
Aip06g00409 982 Gene3D Severin 246 356 IPR029006 -
Aip06g00409 982 MobiDBLite consensus disorder prediction 842 874 - -
Aip06g00409 982 Pfam Gelsolin repeat 264 337 IPR007123 -
Aip06g00409 982 Pfam Gelsolin repeat 29 111 IPR007123 -
Aip06g00409 982 Pfam Gelsolin repeat 532 583 IPR007123 -
Aip06g00409 982 Pfam Gelsolin repeat 405 483 IPR007123 -
Aip06g00409 982 Pfam Gelsolin repeat 149 217 IPR007123 -
Aip06g00409 982 Pfam Gelsolin repeat 635 713 IPR007123 -
Aip06g00409 982 MobiDBLite consensus disorder prediction 772 796 - -
Aip06g00409 982 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Aip06g00409 982 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Aip06g00409 982 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Aip06g00409 982 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Aip06g00409 982 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Aip06g00409 982 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Aip06g00409 982 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Aip06g00409 982 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Aip06g00409 982 ProSiteProfiles Headpiece (HP) domain profile. 917 982 IPR003128 GO:0003779|GO:0007010
Aip06g00409 982 CDD gelsolin_S2_like 139 232 - -
Aip06g00409 982 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Aip06g00409 982 SUPERFAMILY VHP, Villin headpiece domain 916 982 IPR036886 GO:0003779|GO:0007010
Aip06g00409 982 MobiDBLite consensus disorder prediction 772 790 - -
Aip06g00409 982 CDD gelsolin_S4_like 386 487 - -
Aip06g00409 982 SUPERFAMILY Actin depolymerizing proteins 223 346 - -
Aip06g00409 982 PANTHER VILLIN-3-LIKE ISOFORM X1 1 982 - -
Aip06g00409 982 MobiDBLite consensus disorder prediction 875 890 - -
Aip06g00409 982 SUPERFAMILY Actin depolymerizing proteins 383 525 - -
Aip06g00409 982 MobiDBLite consensus disorder prediction 808 925 - -
Aip06g00409 982 MobiDBLite consensus disorder prediction 895 925 - -
Aip06g00409 982 SMART VILL_6 137 234 IPR007122 GO:0051015
Aip06g00409 982 SMART VILL_6 623 720 IPR007122 GO:0051015
Aip06g00409 982 SMART VILL_6 252 344 IPR007122 GO:0051015
Aip06g00409 982 SMART VILL_6 518 607 IPR007122 GO:0051015
Aip06g00409 982 SMART VILL_6 392 490 IPR007122 GO:0051015
Aip06g00409 982 SMART VILL_6 19 117 IPR007122 GO:0051015
Aip06g00409 982 CDD gelsolin_S5_like 519 609 - -
Aip06g00409 982 SUPERFAMILY Actin depolymerizing proteins 596 718 - -
Aip06g00409 982 SUPERFAMILY Actin depolymerizing proteins 134 242 - -
Aip06g00409 982 CDD gelsolin_S3_like 254 343 - -
Aip06g00409 982 Gene3D Severin 5 132 IPR029006 -
Aip06g00409 982 Gene3D Severin 389 518 IPR029006 -
Aip06g00409 982 CDD gelsolin_S1_like 12 124 - -
Aip06g00409 982 MobiDBLite consensus disorder prediction 808 835 - -
Aip06g00409 982 Gene3D Villin headpiece domain 905 982 IPR036886 GO:0003779|GO:0007010
Aip06g00409 982 SMART VHP_1 947 982 IPR003128 GO:0003779|GO:0007010
Aip06g00409 982 SUPERFAMILY Actin depolymerizing proteins 511 613 - -
Aip06g00409 982 PANTHER VILLIN 1 982 IPR007122 GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00409 Aip-Chr6 4798441 4808486 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00409 - - gmx:100803795 1630.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00409 06 4798441 4808486 Aip02g01623 02 65984368 65994148 PCT