Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01623 ATGTCTAGCTCTACAAAAGTTTTGGATCCTGCATTCCAAGGAGTGGGTCAAAGAGTAGGGACCGAGATTTGGAGGATTGAGAATTTTCAGCCAGTTGCGTTGCCCAAATCTGAATATGGGAAATTCTACATGGGGGATTCTTACATTATTTTGCAGACAACGCAAGGAAAAGGAGGCAATTATTATTATGATTTACACTTCTGGCTTGGAAAGGATACTAGTCAGGATGAGGCTGGAACAGCAGCCATTAAAGCTGTTGAACTTGATGCTGCTCTTGGAGGACGAGCAGTGCAGCACAGGGAAGTCCAAGGACATGAATCTGACAAGTTCTTGTCATATTTCAAGCCATGTATAATACCATTGGAAGGGGGTGTTGCATCTGGGTTTAAAACACCAGAAGAAGAGAAGTTTGAAACGCGCTTGTATATATGCAGAGGGAAAAGAGTTGTCAGATTAAGACAGGTGCCTTTTGCCAGGTCATCATTGAATCATGATGATGTGTTCATCCTTGACAGTCAGAATAAGATTTATCAATTCAATGGTGCAAATTCTAACATTCAGGAAAGAGCAAAGGCCTTGGAAGTTATACAGTTCTTGAAGGAAAAATATCATGAAGGGAAATGTGATGTGGCAATTGTTGATGACGGCAAGTTAGATACCGAGTCAGATTCAGGTGAATTTTGGGTTCTTTTTGGTGGTTTTGCTCCCATTGGAAAGAAAGTAATCAGTGACGATGATCTCATTCCGGAGACAATTCCTGCTCAACTTTATAGTATCATTGATGGTGAGGCCAAGGCTGTTGACGGTGAACTTTCTAAATCACTGCTGGAGAATAACAAATGTTATTTACTGGACTGTGGTGCTGAGGTATTTGTCTGGGTTGGTCGGGTAACACAAGTTGATGAACGAAAAGCAGCTTGCCAAACAGCTGAGGAGTTTGTTGCAAGCCAAAATAGGCCAAAATCTACAAGGATAACCAGGGTTATTCAAGGTTATGAAACACATTCATTTAAGTCCAACTTTGATTCTTGGCCGTCAGCATCTGCTACTGCTGGTACTGAAGAAGGAAGAGGCAAGGTTGCAGCTTTGCTCAAACAACAAGGCATAGGTGTCAAAGGAATGGCAAAAAGTAGCACCCCAGTAAATGAGGAAATTCCACCTTTGCTCGAAGGAGGTGGAAAGTTGGAGGTATGGCGAATTGATGGGAATGCTAAGACCCCGTTGCCAAAGGAGGATATTGGTAAATTCTATAGTGGAGATTGCTACATTGTACTGTACACATACCACTCTGGTGAGAGGAAGGAAGACTACTTTTTGTGCTGCTGGTTTGGCAAAAACAGCATTAAGGAGGATCAAACAATGGCTACTCGATTGGCCAATACGATGTTCAACTCATTGAAGGGCAGACCTGTTCAGGGTCGTCTATACGAAGGCAAAGAGTCACCACAGTTTATTGCTCTTTTCCAACCTATGGTGGTCCTTAAGGGAGGCTTAAGCTCTCGATACAAAAGTTCAATATCAGACAAAGAAATATCAGACGAAACATACATGGCAGAAAGTATTGCACTTATTCGAATTTCTGGAACTTCTGTTCATAACAATAAGGCAGTTCAAGTTGATGCTGTGCCAGCATCATTGAATTCTACTGAATGTTTTGTCCTGCAATCTGGCTCTATAATTTTTGTTTGGCAAGGAACACAGAGTTCCTTTGAGCAGCAGCAGCTAGCATCAAAAGTAGCTGATTTTTTAAGGCCAGGAGTTGCTTTAAAGCATGCCAGAGAAGGAACAGAAAGCTCTGCTTTCTGGTTTGCCCTTGGAGGAAAACAAAGTTACACTGGCAAAAAAGTCACTAACGATGTTATCAGAGATCCACATTTGTTCACTTTGTCATTTAAAAATGGGAAATTACATGTTGAGGAGGTTTACAACTTCTCTCAAGATGATTTGTTGACAGAGGACATCCTTATACTTGACACTCATGCAGAAGTGTTTCTTTGGGTTGGTCATTCTGTGGACCCAAAAGAAAAGCAAAATGTGTTCGAAATTGGCCAGGAATACATAAATATGGCTGCATCTTTAGAGGGACTATCTCCACATGTACCACTGTATAAAGTAACAGAAGGCAATGAACCTTGCTTTTTCACAACATACTTTTCATGGGATCATGCTAAAGCTATGGTTCATGGGAACTCATTCCAGAAGAAGGTGTCGATACTCTTCGGGATTGGCCATGCTGTGGAGGAAAAGTCGAATGGGTCGTCAAGTAAAGGGGGACCCAGACAAAGAGCAGAAGCTTTGGCTGCCTTAAACTCGGCATTTAGTTCATCTTCTGAGAAAGCATCCAATGTGGCCCAGGATAGATTGAACGGATTAAGCCAAGGAGGACCAAGACAAAGAGCAGAAGCTTTAGCTGCCTTAAACTCAGCATTTAGTTCATCTGGAGCCAAGACTGCTAATAGCCCCAGGTCATCCGGAAAAGGTCAGGGATCACAAAGAGCAGCAGCAGTAGCTGCTCTTTCATCAGTTCTTACTGCTGAAAAGAAATCCCCCGATGTTTCTCCTGTGTCAGGCGGTAGTCCTGTTACACAAACTAGCTTTACTGAAGCTAAAAGTGAAAGTGCGTCTTCTGAAACAGAAGAAGCTGCAGAAGCCAAGGAAACTGTGGAACATGTCTCTGATAGCCCAAAACTAGAAATTGTGGAGGATAGGGATAATAGTCAAGGCTCTCGAAGGATATTCAGTTATGATGAATTAAAATCTAAAAATGTGTCTGGAATCGATCTTAAACGGAGAGAGACCTATCTGTCAGAGGAAGAATTCAACAGTATTTTTGGAATGGAAAAGGAAGCATTCTATAAATTACCAAGATGGAAGCAGGACATGTTAAAAAAGAAATTTGAATTGTTCTAG 2910 0.4175 MSSSTKVLDPAFQGVGQRVGTEIWRIENFQPVALPKSEYGKFYMGDSYIILQTTQGKGGNYYYDLHFWLGKDTSQDEAGTAAIKAVELDAALGGRAVQHREVQGHESDKFLSYFKPCIIPLEGGVASGFKTPEEEKFETRLYICRGKRVVRLRQVPFARSSLNHDDVFILDSQNKIYQFNGANSNIQERAKALEVIQFLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISDDDLIPETIPAQLYSIIDGEAKAVDGELSKSLLENNKCYLLDCGAEVFVWVGRVTQVDERKAACQTAEEFVASQNRPKSTRITRVIQGYETHSFKSNFDSWPSASATAGTEEGRGKVAALLKQQGIGVKGMAKSSTPVNEEIPPLLEGGGKLEVWRIDGNAKTPLPKEDIGKFYSGDCYIVLYTYHSGERKEDYFLCCWFGKNSIKEDQTMATRLANTMFNSLKGRPVQGRLYEGKESPQFIALFQPMVVLKGGLSSRYKSSISDKEISDETYMAESIALIRISGTSVHNNKAVQVDAVPASLNSTECFVLQSGSIIFVWQGTQSSFEQQQLASKVADFLRPGVALKHAREGTESSAFWFALGGKQSYTGKKVTNDVIRDPHLFTLSFKNGKLHVEEVYNFSQDDLLTEDILILDTHAEVFLWVGHSVDPKEKQNVFEIGQEYINMAASLEGLSPHVPLYKVTEGNEPCFFTTYFSWDHAKAMVHGNSFQKKVSILFGIGHAVEEKSNGSSSKGGPRQRAEALAALNSAFSSSSEKASNVAQDRLNGLSQGGPRQRAEALAALNSAFSSSGAKTANSPRSSGKGQGSQRAAAVAALSSVLTAEKKSPDVSPVSGGSPVTQTSFTEAKSESASSETEEAAEAKETVEHVSDSPKLEIVEDRDNSQGSRRIFSYDELKSKNVSGIDLKRRETYLSEEEFNSIFGMEKEAFYKLPRWKQDMLKKKFELF 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01623 969 CDD gelsolin_S5_like 520 610 - -
Aip02g01623 969 CDD gelsolin_S4_like 387 488 - -
Aip02g01623 969 Gene3D Severin 253 355 IPR029006 -
Aip02g01623 969 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Aip02g01623 969 MobiDBLite consensus disorder prediction 811 832 - -
Aip02g01623 969 SUPERFAMILY Actin depolymerizing proteins 384 529 - -
Aip02g01623 969 Gene3D Severin 133 246 IPR029006 -
Aip02g01623 969 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Aip02g01623 969 PRINTS Gelsolin family signature 412 428 IPR007122 GO:0051015
Aip02g01623 969 PRINTS Gelsolin family signature 438 456 IPR007122 GO:0051015
Aip02g01623 969 PRINTS Gelsolin family signature 471 491 IPR007122 GO:0051015
Aip02g01623 969 PRINTS Gelsolin family signature 534 554 IPR007122 GO:0051015
Aip02g01623 969 PRINTS Gelsolin family signature 594 613 IPR007122 GO:0051015
Aip02g01623 969 PRINTS Gelsolin family signature 646 668 IPR007122 GO:0051015
Aip02g01623 969 PRINTS Gelsolin family signature 675 694 IPR007122 GO:0051015
Aip02g01623 969 SMART VILL_6 625 720 IPR007122 GO:0051015
Aip02g01623 969 SMART VILL_6 139 234 IPR007122 GO:0051015
Aip02g01623 969 SMART VILL_6 19 117 IPR007122 GO:0051015
Aip02g01623 969 SMART VILL_6 252 344 IPR007122 GO:0051015
Aip02g01623 969 SMART VILL_6 393 491 IPR007122 GO:0051015
Aip02g01623 969 SMART VILL_6 519 608 IPR007122 GO:0051015
Aip02g01623 969 SUPERFAMILY VHP, Villin headpiece domain 908 969 IPR036886 GO:0003779|GO:0007010
Aip02g01623 969 Pfam Gelsolin repeat 534 584 IPR007123 -
Aip02g01623 969 Pfam Gelsolin repeat 29 111 IPR007123 -
Aip02g01623 969 Pfam Gelsolin repeat 407 485 IPR007123 -
Aip02g01623 969 Pfam Gelsolin repeat 270 337 IPR007123 -
Aip02g01623 969 Pfam Gelsolin repeat 640 714 IPR007123 -
Aip02g01623 969 Pfam Gelsolin repeat 152 217 IPR007123 -
Aip02g01623 969 Pfam Villin headpiece domain 934 969 IPR003128 GO:0003779|GO:0007010
Aip02g01623 969 Gene3D Severin 523 613 IPR029006 -
Aip02g01623 969 Gene3D Severin 5 132 IPR029006 -
Aip02g01623 969 PANTHER VILLIN 1 969 IPR007122 GO:0051015
Aip02g01623 969 CDD gelsolin_S6_like 623 721 - -
Aip02g01623 969 MobiDBLite consensus disorder prediction 855 872 - -
Aip02g01623 969 SUPERFAMILY Actin depolymerizing proteins 597 719 - -
Aip02g01623 969 Gene3D Villin headpiece domain 898 969 IPR036886 GO:0003779|GO:0007010
Aip02g01623 969 PANTHER VILLIN-3-LIKE ISOFORM X1 1 969 - -
Aip02g01623 969 SMART VHP_1 934 969 IPR003128 GO:0003779|GO:0007010
Aip02g01623 969 SUPERFAMILY Actin depolymerizing proteins 223 346 - -
Aip02g01623 969 MobiDBLite consensus disorder prediction 845 894 - -
Aip02g01623 969 SUPERFAMILY Actin depolymerizing proteins 512 616 - -
Aip02g01623 969 CDD gelsolin_S3_like 254 343 - -
Aip02g01623 969 Gene3D Severin 389 522 IPR029006 -
Aip02g01623 969 Gene3D Severin 618 735 IPR029006 -
Aip02g01623 969 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Aip02g01623 969 CDD gelsolin_S1_like 12 124 - -
Aip02g01623 969 ProSiteProfiles Headpiece (HP) domain profile. 907 969 IPR003128 GO:0003779|GO:0007010
Aip02g01623 969 CDD gelsolin_S2_like 138 232 - -
Aip02g01623 969 MobiDBLite consensus disorder prediction 873 894 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01623 Aip-Chr2 65984368 65994148 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01623 - - gmx:100788765 1565.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01623 02 65984368 65994148 Aip02g01623 02 65984368 65994148 ECH
Aip06g00409 06 4798441 4808486 Aip02g01623 02 65984368 65994148 PCT