Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00350 ATGAATCTGAAAAATTGTTCTTTTTATGGTGGGGTGTCCAAGGTTTTGATATTATCGGACTTGGAAGATGACTATATGAACCCTTTTGATGCCTCGTCTCGAGTCAATTACTTCGTGGTTCCCGAGTTTATTGGGCAGGGATTACTCTGTGCTCTTTGCCTCCTCACAGGTCATTGGATCATGTTTTTGCTCACACTTCCTCTTGCTTGCTATCATGCCAATCTGTTTATGAAACGGCAGCATCTTCTTGATGTTACTGAAGTTTTTAGGGTGCTTAAAGCTGAGAAGAAATTTCGGATTGTCAAACTTGCTTTCTACTTATCAGTCCTGATTATAACTATCTTCAGGCTTGTACTACTACTTGTCTACTATTTTGATCTTGAAGATGAATGA 393 0.3919 MNLKNCSFYGGVSKVLILSDLEDDYMNPFDASSRVNYFVVPEFIGQGLLCALCLLTGHWIMFLLTLPLACYHANLFMKRQHLLDVTEVFRVLKAEKKFRIVKLAFYLSVLIITIFRLVLLLVYYFDLEDE 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00350 130 PANTHER PROTEIN CORNICHON 12 120 - -
Aip06g00350 130 Pfam Cornichon protein 12 115 IPR003377 GO:0016192
Aip06g00350 130 PANTHER CORNICHON-RELATED 12 120 - -
Aip06g00350 130 SMART Cornichon_2 8 115 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00350 Aip-Chr6 4080872 4083494 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00350 K20368 - gmx:100527262 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00350 06 4080872 4083494 Aip06g00350 06 4080872 4083494 ECH
Aip06g00350 06 4080872 4083494 Aip02g01812 02 79127646 79133137 PCT