Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01812 ATGGGTGGGAAACTCTTCTTTTGGCTCGTCATTTGTTTCCCTTCCAGCATTGCCCTTCTCGCCACAACTTTCTACCAGGTTTTGATCCTATCTGACTTGGAAGCTGACTATATAAACCCGTTCGACGCGGCGTCTCGGATTAACTACTTCATTCTTCCTGAGTACATAGGACAGGGAGCTCTCTGCGTACTGTGCCTCGTCACTGGACACTGGTTCATGTTCTTGCTCTCTCTTCCAGTTACTTGCTATCACATCATGCGATATGTGAAACGGGAGCACCTTATTGATGTTACTGAAGTGTTTAGAGGACTTAATGCTGAGAGGAAATTTCGGCTAGCCAAACTTGTCATGTACTTAATACTCCTCATTGTAGTCATATTCAGGCTTACATTAATCGGTATCTACTATTTAGGCATTGAAACCGATGATGAACCGGGAAGCTTCTGGTAA 450 0.4422 MGGKLFFWLVICFPSSIALLATTFYQVLILSDLEADYINPFDAASRINYFILPEYIGQGALCVLCLVTGHWFMFLLSLPVTCYHIMRYVKREHLIDVTEVFRGLNAERKFRLAKLVMYLILLIVVIFRLTLIGIYYLGIETDDEPGSFW 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01812 149 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Aip02g01812 149 PANTHER CORNICHON-RELATED 3 130 - -
Aip02g01812 149 SMART Cornichon_2 6 127 IPR003377 GO:0016192
Aip02g01812 149 PANTHER PROTEIN CORNICHON 3 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01812 Aip-Chr2 79127646 79133137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01812 K20368 - gmx:100500341 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01812 02 79127646 79133137 Aip02g01812 02 79127646 79133137 ECH
Aip06g00350 06 4080872 4083494 Aip02g01812 02 79127646 79133137 PCT