Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00249 ATGGCGGCTGTAACTGCTGCTATTCCTCGTACCGATCCGCCAATGGTCGTGTCGGATTCCTTCGCCAAGGACGCCATACTCGCCTGGTTCCGCGGCGAATTTGCTGCTGCAAATGCCATCATCGACGCCCTCTGCTCTCACCTCGCCGCCGCAGCCTCATCCTCCGACGAGTACGACGCCGTGTTCGCTGCCATACACCGCCGCAGGCTCAACTGGATTCCCGTCATCCAGATGCAGAAGTACCACTCCATTGCTGACGTGACTCTCGAGCTCCGCAAGGTCACCGAAAAGAAGACGGCGACGGCGGAGGAGGCGGAGGCGGAGAGTAATGGCGGCGGAGACGATGAGAAGGGGAAAGTGGAGGAGGAAGTGACGGAGAGTGTTGGAAATGGCGAAGGCGAAGGCGAAGCTCAACAGAGTCATGAGGAGTATGAATCTCCAGAGAGCGAGATTACTGATTCAGGATCTCAAGAAATGCACCCCAGTTTGACAAACATTAGCATATGTTCCAATCACGAAGAATGTGAAGGACGCTCATCACTGATAAAGTTGACAAAAGGTTTCCAAGCAAAGGAGTCAGTGAAGGGCCATATGGTCAATGTTGTGAAAGGATTGAAGTTATATGAAGCCATTTTCAATGACTCAGAAATCTGTAAGCTGACTGATTTTGTAAACGAGATCCATGTGGCTGGCCAGAAAGGGGAACTCTCCGGTGAAACTTTCATACTATTCAACAAGCAGATGAAGGGGAACAAGAGAGAGCTGATTCAGCTAGGTGTTCCAATATTCGGGCAGATAAATGATGCAAAGAGCAACATAGAACCGATTCCAGCACTTCTTCATGGTGTCATTGATCACCTTATACAATGGAAGTTAATTCCAGAGTATAAAAGGCCAAATGGTTGTATCATTAACTTCTTTGAGGAGGGGGAATTTTCTCAGCCATTCCTGAAACCACCCCATCTGGACCAGCCTATATCAACCCTTCTTCTCTCTGATTCAACTATGGCTTTTGGACGTATCCTAATGAGTGAAAATGATGGGAACTACAAGGGGCCACTCATGCTCTCATTGAAGAAGGGGTCTCTTTTAGTGATGAGAGGAAATAGTGCAGACATGGCAAGGCACGTAATGTGTCCATCACCGAACAGAAGGATTAGCATCACCTTCTTTAGAGTGAGGCCAGACTCCAATCAATACCAGTCACTAACTCCTACCGTGACAAACGCAATGACTCTTTGGCAACCCGGCATTGCTAGCCCATATGCTGTGCCAAATGGAGCTGTAAGCAGCTATGAGACTATGGACATGATGCCCAAATGGGGAATACTTCATGCTCCAATGGTCATGCTAACAAACCCTGTACACCCTATGGCAATGAACCCTGGCAAACTTCCTGGTGGCGCTGGGACTGGGGTTTTCTTGCCTTGGAAGGTAGCATCCAGGAAACCTGCAAGGCATCTCCCACCTCGAGCCCAAAAGGGACGCCTTATGGCATTATCATCGCCAACCAATTCACATATGGGAGAGTCAACTTCTGAACCCAGCATTACAGTTGGAGGTTAA 1566 0.4891 MAAVTAAIPRTDPPMVVSDSFAKDAILAWFRGEFAAANAIIDALCSHLAAAASSSDEYDAVFAAIHRRRLNWIPVIQMQKYHSIADVTLELRKVTEKKTATAEEAEAESNGGGDDEKGKVEEEVTESVGNGEGEGEAQQSHEEYESPESEITDSGSQEMHPSLTNISICSNHEECEGRSSLIKLTKGFQAKESVKGHMVNVVKGLKLYEAIFNDSEICKLTDFVNEIHVAGQKGELSGETFILFNKQMKGNKRELIQLGVPIFGQINDAKSNIEPIPALLHGVIDHLIQWKLIPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPISTLLLSDSTMAFGRILMSENDGNYKGPLMLSLKKGSLLVMRGNSADMARHVMCPSPNRRISITFFRVRPDSNQYQSLTPTVTNAMTLWQPGIASPYAVPNGAVSSYETMDMMPKWGILHAPMVMLTNPVHPMAMNPGKLPGGAGTGVFLPWKVASRKPARHLPPRAQKGRLMALSSPTNSHMGESTSEPSITVGG 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00249 521 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 11 519 - -
Aip06g00249 521 SUPERFAMILY Clavaminate synthase-like 198 394 - -
Aip06g00249 521 Pfam 2OG-Fe(II) oxygenase superfamily 303 392 IPR044861 -
Aip06g00249 521 MobiDBLite consensus disorder prediction 100 162 - -
Aip06g00249 521 MobiDBLite consensus disorder prediction 496 521 - -
Aip06g00249 521 Gene3D - 188 402 IPR037151 -
Aip06g00249 521 MobiDBLite consensus disorder prediction 111 126 - -
Aip06g00249 521 MobiDBLite consensus disorder prediction 498 521 - -
Aip06g00249 521 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 298 395 IPR005123 -
Aip06g00249 521 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 11 519 IPR044842 GO:0003729|GO:0006402|GO:0032451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00249 Aip-Chr6 2954264 2961374 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00249 K10767 - gmx:100796344 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00249 06 2954264 2961374 Aip06g00249 06 2954264 2961374 ECH
Aip06g00249 06 2954264 2961374 Aip02g02848 02 104565240 104572126 PCT