Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02848 ATGGCGTGTGGTAGCAGAAGGAAACCTGACGCCATCCTCGCATGGTTCCGCGGAGAATTTGCCGCCGCAAACGCCATCATCGACGCTCTCTGCGCTCACCTCGCGCAATTGAGCTCCGTCTCCGGCGACGACGGCCGTTACGATGCGTTGTTCTCCGCCGTCCACCGCCGTAGGCTCAACTGGATCCCGGTGCTCCAGATGCAGAAGTATCACTCCATTGCTGACGTGGCGCTCGAGCTGCGAAACGTCACAGACCGAGAGAAAAATATCGCCGGAGAAAACGCCGCCGGTGAGATCGCCGATGAGAAGGAGAAGATCGGAGAAGAAAAGGTGACGGAAATCGAAGAGAACGGTGGCGAACATAACGAAGAGTATGAATCTCCGAAGAGCGAAATCACTGATTCAGGGTCTCAAGAAATGCAGGGAAGTTCAACGAACAATATTAACATATGTTCCAATCATGAAGAATGTGAAGGAAGATCATCACAGATCAAGTTAACTAAAGGTTTCTCAGCAAAGGAATCAGTGAAGGGGCACATGGTTAATGTTGTGAAAGGTTTGAAGTTATATGAAGATGTTTTCACTGATTCAGAACTTTGCAAGCTGACAGATTTTGTGAATGAGATCCATGCTGCCGGCCAGAATGGAGAACTCTCAGGTGAAACCTTCATTCTATTCAACAAACAAGTGAAAGGAAACAAGAGAGAGCTGATTCAGCTGGGTGTTCCATTATTTGGACAGATAAAGGAGGACACAAAAAGCAATATAGAGCCAATTCCAGCACTTCTTGAACATGTCATAGATCACCTTATACAATGGAAGTTAATTCCAGAGTATAAAAGGCCAAATGGGTGTATCATCAACTTTTTTGAAGAGGAGGAGTTTTCTCAGCCATTCCTGAAACCACCACATCTGGATCAACCTGTCTCCACTCTTGTTCTCTCTGAATCAACTATGGCTTTTGGGCGAATCCTTATGAGTGAAAATGATGGAAACTACAAGGGTCCACTCATGCTCTCATTGAAGATGGGGTCACTTCTGGTGATGAGAGGGAACAGTGCTGACATGGCAAGGCATGTGATGTGTCCATCTCCTAACAGAAGGGTCAGCATCACCTTCTTTAGAGTGAGGCCAGACTCAAACCAATCCCAATCACCAACCACACCAACAATGGCTGCAGGTGCAATGACCCTTTGGCAACCAAGCATTGCTAGCCCATATGGTGCTGCTATAACTGGTTATGATGGTATGGACATGATGATGCCAAAATGGGGTATGATCCGTGCCCCGATGGTGATGCTAGCCGCTGCCCCTGTGCCCCCTATGGTATTGAACCCTCGCAAGCTTGCCGGTGGTGGTACCGGTGTTTTCTTGCCATGGAATGTGCCATCAAGAAAACCTCCAAAGCATCTTCCGCCGAGGGCACAAAAAGGAAGGCTTCTAGCTTTAAGTGCCCCACCAGTTGAACCACACATTGGTGAGTCCACTTCAGAGCCAAGCATAAGTGTTGAAGGATAG 1518 0.4789 MACGSRRKPDAILAWFRGEFAAANAIIDALCAHLAQLSSVSGDDGRYDALFSAVHRRRLNWIPVLQMQKYHSIADVALELRNVTDREKNIAGENAAGEIADEKEKIGEEKVTEIEENGGEHNEEYESPKSEITDSGSQEMQGSSTNNINICSNHEECEGRSSQIKLTKGFSAKESVKGHMVNVVKGLKLYEDVFTDSELCKLTDFVNEIHAAGQNGELSGETFILFNKQVKGNKRELIQLGVPLFGQIKEDTKSNIEPIPALLEHVIDHLIQWKLIPEYKRPNGCIINFFEEEEFSQPFLKPPHLDQPVSTLVLSESTMAFGRILMSENDGNYKGPLMLSLKMGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQSQSPTTPTMAAGAMTLWQPSIASPYGAAITGYDGMDMMMPKWGMIRAPMVMLAAAPVPPMVLNPRKLAGGGTGVFLPWNVPSRKPPKHLPPRAQKGRLLALSAPPVEPHIGESTSEPSISVEG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02848 505 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 10 503 - -
Aip02g02848 505 MobiDBLite consensus disorder prediction 114 130 - -
Aip02g02848 505 Gene3D - 170 384 IPR037151 -
Aip02g02848 505 SUPERFAMILY Clavaminate synthase-like 177 377 - -
Aip02g02848 505 MobiDBLite consensus disorder prediction 463 505 - -
Aip02g02848 505 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 10 503 IPR044842 GO:0003729|GO:0006402|GO:0032451
Aip02g02848 505 MobiDBLite consensus disorder prediction 114 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02848 Aip-Chr2 104565240 104572126 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02848 K10767 - gmx:100791586 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02848 02 104565240 104572126 Aip02g02848 02 104565240 104572126 ECH
Aip06g00249 06 2954264 2961374 Aip02g02848 02 104565240 104572126 PCT