Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00220 ATGGAAGCAACAACAACAACTACTACTACTACTACTACTAGTACTACTACTCATCATGTAATATCTATTGTGAATGGAGGAGAAGAGAGTGTTGGTGAGAATAATAATAGTAAGGAAAAGAGTAGAGTAGGGAAGTTGTTATCTCTTGTCCACATTGCTAGTTGTTGTTGCTATGTGAATTTGGACACAAGGAAGACAATCCACAGCATCAAAGTGGGAGTTTCATTGGTTTTGGTGTCACTATTTTACCTCTTGAACCCTCTCTTTGATCAAGTTGGAGAAAATGCAATGTGGGCTATCATGACTGTTGTTGTCACCTTTGAGTTCTATCCAGGAGCAACACTGGGAAAGGGCATCAACCGTGGATTGGGAACTATATTAGGAGGTGCAATGGGTGTCCTAACAGCAATTTTTGCCCAAACCATTGGAGGGATTGCTAACTCTATTACCATCGCTATTCTTATTTTTGTCTCCGGATCAGTTGCTACATATTTTCGACTGGTTCCAAGCATAAAGAAAAGATACGACTATGGAGTGATGATATTCATACTCACATTCAACCTGGTAGCGGTGTCTGGAGTGCGTGTTGAAGACCCTGTTTGGGAAATAGCACGTCAGCGTCTCTTAACCATTCTCATGGGTTTCATAGTCTGTCTTTGTGTCAACATCTTCGTTTTTCCCTTGTGGGCCAGTGACGAACTTCATCATTCTCTTGTAACTACCTTTTTCAACCTTGCCAACACAATTCAACGGTGTTTGCTGGAAGAAGAAGAAGATGCCAAATTCGTTACTGAAAAAGAAAAAGAAAAAGAAAAGGAATCATCATCCGCTGTTAATAACAAATTCTCTCTTTGTAATTCTGTCTTGGACTCCAAGTCAAAACATGAACTATTGGCAAATTTCGCAAAATGGGAACCTTGGCATGGGAAATTCGGATTTTCGTACCCTTGGGAGAAGTACTTGAAGATTGGACAAGTTCTTCGAGAACTTGCTGCATTTATTCTTACAGTTGGAAATTGCCTTCAAGCATCAAAACAGGTAGGTATATATAAAAGGCCATGGCATTATTGA 1071 0.3987 MEATTTTTTTTTTSTTTHHVISIVNGGEESVGENNNSKEKSRVGKLLSLVHIASCCCYVNLDTRKTIHSIKVGVSLVLVSLFYLLNPLFDQVGENAMWAIMTVVVTFEFYPGATLGKGINRGLGTILGGAMGVLTAIFAQTIGGIANSITIAILIFVSGSVATYFRLVPSIKKRYDYGVMIFILTFNLVAVSGVRVEDPVWEIARQRLLTILMGFIVCLCVNIFVFPLWASDELHHSLVTTFFNLANTIQRCLLEEEEDAKFVTEKEKEKEKESSSAVNNKFSLCNSVLDSKSKHELLANFAKWEPWHGKFGFSYPWEKYLKIGQVLRELAAFILTVGNCLQASKQVGIYKRPWHY 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00220 356 Coils Coil 253 273 - -
Aip06g00220 356 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 18 347 - -
Aip06g00220 356 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 18 347 - -
Aip06g00220 356 Pfam Aluminium activated malate transporter 62 347 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00220 Aip-Chr6 2352377 2355822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00220 62 347 Miscellaneous Gene Families AT1G08440 43.945 6.25e-81 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00220 - - ahf:112758020 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00220 06 2352377 2355822 Aip06g00220 06 2352377 2355822 ECH
Aip06g00220 06 2352377 2355822 Aip02g02806 02 104037691 104042111 PCT