Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02806 ATGGAATCAACTCATGTTATATCCATTACCAATAATGAAGAAGAAAAGGTTGTTCATAACAAAGAGAAGAACAACAACAATAAAACATTCCCATTTTCTCCATCATTTCCAACCATTATTTCCCATGTTAAAGAAAAGAAATTCAACATGTCTTTTGTTCCAATCTTCCCTTCATTCTCCCATCTTAGTGAGCAAGAAACTAAGAACATGATTCATAGCATCAAAGTTGGAATCTCGCTTGTTTTGGTTTCACTTCTTTACCTCTTGGATCCTCTCTATCAACAAGTTGGAGAAAATGCAATGTGGGCTATCATGACTGTTGTTGTCATCTTTGAATTCTCTGCAGCAGGAGCTACACTTGGTAAGGGTTTAAACCGTGGAATGGGAACTATAGTAGGAGGTGGACTAGGTTGCATAGCAGCAATTTTGGCTCAAAAGCTCGGTGGGGTTGGCAACTCCATTATCATTGGAATTTGTATATTCATCTTTGGAGCAATTGCAACATATTTTAGAATGATTCCAAGTATAAAGAGAAGATATGATTATGGGGTGATGATATTCATTCTGACATTAAACCTTGTATTGGTGTCTGTGGTGCGTGACGAACAACAAGTTTGGGAAATAGCACGTGATCGTCTCTTAACAATTGTGATTGGTTTCATCATTTGCATTTCTGTGAGCTGCTTCTTGTTTCCTCTTTGGGCCAGCAATGAATTTCATGATTCCACTCACTCAACCTTTCAACAACTCGCCAATGCAATCCAAGGGTGTGTGGAGGATTATATGAGATTTGCTGACGAAAAAGAAAATGAGGCCATCAACAGTACCAACTTCACTTTTTGCAAGACTTTGTTGAACTCCAAGTCAAAGGATGAGTTACTGGCAAATTATGCAAAGTGGGAGCCCTTGCATGGAAAATTTGGATACTCGTACCCTTGGCAAAATTACCTAAAGATTGGAGAGGTTAATCGGGATTTGGCTGCAATTATTCTTGTTCTTGGAAGGTGCCTCCAAACCTCAAAAAAGCCCATGGAATTGCAATCATGGAGTGAAACAATCCAAGTAATTGAACCATGTTTTGAAGCAATTGGGTCAAATATTGTGTGGAGTCTAAAGGAACTTGGAGAAAGCATGAAACAAATGAGGAAGATTCATGCTTCTCAAATCTCAACTAAGTTAAAGGCATCAAGATCAGAGATAAGCATGGTGGTTAAGATGATTATTTCCACATCCAAGAAGATATCAACATCAATGCTTAATAATAATGATGAGAATAATAATTGTTATGATGATGATGATGATGCATCACTTGCAACTGCTAGCTTCTTGTTCTTGCTCAAGGAGGTTGTGAACAAGGTAGAGGAGTTGACCAAAGTGGTGGAACAACTTGGAGATATTGCTGGCTTTCCTACACATATTCAACTCTAG 1428 0.3824 MESTHVISITNNEEEKVVHNKEKNNNNKTFPFSPSFPTIISHVKEKKFNMSFVPIFPSFSHLSEQETKNMIHSIKVGISLVLVSLLYLLDPLYQQVGENAMWAIMTVVVIFEFSAAGATLGKGLNRGMGTIVGGGLGCIAAILAQKLGGVGNSIIIGICIFIFGAIATYFRMIPSIKRRYDYGVMIFILTLNLVLVSVVRDEQQVWEIARDRLLTIVIGFIICISVSCFLFPLWASNEFHDSTHSTFQQLANAIQGCVEDYMRFADEKENEAINSTNFTFCKTLLNSKSKDELLANYAKWEPLHGKFGYSYPWQNYLKIGEVNRDLAAIILVLGRCLQTSKKPMELQSWSETIQVIEPCFEAIGSNIVWSLKELGESMKQMRKIHASQISTKLKASRSEISMVVKMIISTSKKISTSMLNNNDENNNCYDDDDDASLATASFLFLLKEVVNKVEELTKVVEQLGDIAGFPTHIQL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02806 475 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 4 470 - -
Aip02g02806 475 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 4 470 - -
Aip02g02806 475 Pfam Aluminium activated malate transporter 62 464 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02806 Aip-Chr2 104037691 104042111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02806 55 405 Miscellaneous Gene Families AT5G46600 40.000 1.22e-81 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02806 - - adu:107475845 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02806 02 104037691 104042111 Aip02g02806 02 104037691 104042111 ECH
Aip06g00220 06 2352377 2355822 Aip02g02806 02 104037691 104042111 PCT