Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00190 ATGAATTCAATGGCGGCATCAAGAAGGGTGATTGAGATGCTGCTTTGTATGTCCTTGTTGGTGATGATGAGAATAACAACAATGGCACAACAAACACAACAATATCCTGAGACTAGTACTTCTTCAAGTTGCAGCAATGTTCTGCTAAGTCTTTCTCCGTGCCTAGATTACATAACAGGAAGTGCTTCAACACCATCATCTGGTTGTTGTTCACAACTTGCATATGTGGTGGGGTCACAGCCACAGTGCCTGTGTGAAGTTGTTAATGGTGGTGCTTCTTCAATTGCTGCCACCCTCAACATCAATCAGACTCAGGCTTTGGGCCTTCCTAATGCCTGCAGATTACAAACTCCTCCAATTACCATCTGCAGTGCTGTTACTGGATCTGTTTCTCCGCCGGCAGGTGTTTATTATGCGCCCAACATTCCAAATTCACCTGCAGCAGGGATTGGATCAACAATTATTTCATCAACGAACGGTGGAGTTGGCGGTGGTTCATTTCACTGGAATTCAAGTTCCACAGCTAAATTACCTTCTTTGCTGCTTGTCATGTTTTTCTTTGCAACGACTTTGTCTTTGACTTTCGCCTTCACGACCATTACCTAG 606 0.4422 MNSMAASRRVIEMLLCMSLLVMMRITTMAQQTQQYPETSTSSSCSNVLLSLSPCLDYITGSASTPSSGCCSQLAYVVGSQPQCLCEVVNGGASSIAATLNINQTQALGLPNACRLQTPPITICSAVTGSVSPPAGVYYAPNIPNSPAAGIGSTIISSTNGGVGGGSFHWNSSSTAKLPSLLLVMFFFATTLSLTFAFTTIT 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00190 201 SMART aai_6 44 123 IPR016140 -
Aip06g00190 201 Gene3D - 41 121 IPR036312 -
Aip06g00190 201 PRINTS Plant phospholipid transfer protein signature 43 59 IPR000528 GO:0006869|GO:0008289
Aip06g00190 201 PRINTS Plant phospholipid transfer protein signature 64 78 IPR000528 GO:0006869|GO:0008289
Aip06g00190 201 PRINTS Plant phospholipid transfer protein signature 100 117 IPR000528 GO:0006869|GO:0008289
Aip06g00190 201 Pfam Probable lipid transfer 27 123 IPR016140 -
Aip06g00190 201 CDD AAI_LTSS 51 115 - -
Aip06g00190 201 PANTHER LIPID TRANSFER PROTEIN 12 197 - -
Aip06g00190 201 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 43 124 IPR036312 -
Aip06g00190 201 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 12 197 IPR043325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00190 Aip-Chr6 1948780 1951723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00190 39 195 Lipid Metabolism Gene Families AT3G22600 41.975 2.00e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00190 - - adu:107493010 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00190 06 1948780 1951723 Aip06g00190 06 1948780 1951723 ECH
Aip02g00787 02 12329107 12330339 Aip06g00190 06 1948780 1951723 PCT