Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00787 ATGGCAAGATCTTCTTTGAGCTTAGTTATTATGGTTCTTGTTGTGGGGGCCACAATGTGGAACCAAGAAGCTAAAGCTCAATCATCATCATCATCAAGTTGCACAAGCACATTAACTAGCTTGAGTCCTTGCTTGAACTACATAATGGGAAGCTCATCAACACCATCATCTTCATGTTGCTCTCAACTCTCAAGTGTGGTTAAATCTTCCCCACAGTGCTTATGCTCTGTCCTTAATGGTGGAGGTTCCAATTTGGGAATCCCCATTAACCAAACTCTTGCTTTGTCTCTTCCTAGTGCTTGCAAAGTTCAAACTCCACCAGTAAGCCAATGCAAAGGTGTTAATGGAGGAGCATCTTCGGGTTCTCCGGTGGGATCTCCATTTGGTTCCCCAGCTGAATCTCCAGCTGATTCACCTGAAGGCTCAATTGCACCTTCATATTCAGGTTCAGATTCTCCCTCAGTTGCAGGATCTAAGAGAGTTCCAGGAACAAATGGTGGGTCATCTGATGGAAGCAACATTAAATTCCCCTCCCACTTTTTACTCTCTCTTGTAATTGTTTCTTGTTTCTCTTCCATCACCAACCTCTGA 591 0.4382 MARSSLSLVIMVLVVGATMWNQEAKAQSSSSSSCTSTLTSLSPCLNYIMGSSSTPSSSCCSQLSSVVKSSPQCLCSVLNGGGSNLGIPINQTLALSLPSACKVQTPPVSQCKGVNGGASSGSPVGSPFGSPAESPADSPEGSIAPSYSGSDSPSVAGSKRVPGTNGGSSDGSNIKFPSHFLLSLVIVSCFSSITNL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00787 196 CDD AAI_LTSS 43 103 - -
Aip02g00787 196 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 9 189 - -
Aip02g00787 196 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 9 189 IPR043325 -
Aip02g00787 196 MobiDBLite consensus disorder prediction 141 170 - -
Aip02g00787 196 MobiDBLite consensus disorder prediction 112 170 - -
Aip02g00787 196 MobiDBLite consensus disorder prediction 112 127 - -
Aip02g00787 196 Pfam Probable lipid transfer 17 111 IPR016140 -
Aip02g00787 196 PRINTS Plant phospholipid transfer protein signature 33 49 IPR000528 GO:0006869|GO:0008289
Aip02g00787 196 PRINTS Plant phospholipid transfer protein signature 54 68 IPR000528 GO:0006869|GO:0008289
Aip02g00787 196 PRINTS Plant phospholipid transfer protein signature 88 105 IPR000528 GO:0006869|GO:0008289
Aip02g00787 196 Gene3D - 31 111 IPR036312 -
Aip02g00787 196 SMART aai_6 34 111 IPR016140 -
Aip02g00787 196 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 111 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00787 Aip-Chr2 12329107 12330339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00787 3 193 Acyl Lipid Metabolism Gene Families AT2G48130 46.632 1.89e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00787 - - adu:107473429 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00787 02 12329107 12330339 Aip02g00787 02 12329107 12330339 ECH
Aip02g00787 02 12329107 12330339 Aip06g00190 06 1948780 1951723 PCT