Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00180 ATGGAAGCAAAGTGCAGCAACATCAACTGCCGGCGGCCGGAGTTTCTTCCTCCACCAGCGGGAGGGACCCACCTCCCGGAGAGTCCAAGGGTGCCAATGGAGTTCCTGTCTCGCTCATGGAGTGCCTCAGCCCTTGAGGTCTGTAAGGCACTGGCTCCTCACCAACCACCACTTCATCATCTTCTTCCTCCTTCTTCCAAGACTACTTCAAATGGTTCCTACACTTCTTCTTCTTCCCTTATTCCCGAAGAAACCGGTTGTGGTGACTCTGAAGAGTTCCCATCCTCATCTCTCATCTCAACTACTTCTTTGTCCAAGAACCAGTTCTCTTTTGTTTCTTCTGCTACCTCTCAGCTTGTCCTTGAACGCATTATGTCACAATCAGCAAGAGAGCAGGAAGTGTCGCCATTAACTTCTGGAAGACTCTCACACAGTAGTGAGCCTCTGAATGGTGGTGGTTCGTTAACCGGAACAGACAGTCCCCCAATTTCACCTTCTGATGAATTTGATGATGTTGTTAAGTTTTTCCGGGCAAACAATTCCATTCACCCCTTATTCAATGGTGGAAGAGCCAGTGCTGCAATTGGCAATGGCGCGGCACCCTCAGGGCCAAAGACAGTTGGAAGATGGTTGAAGGACAGGAGGGAGAAGAAGAAAGAAGAAACAAGAACTCACAATGCTCAGCTGCATGCTACCATCTCAGTGGCTGCAGTGGCTTCTGCCGTGGCAGCCATCGCGGCTGCAACGGCTGCTTCATCTGCACCAAGCAAGGATGAGAGGATGGCCAAGACTGACATGGCTGTGGCCTCTGCAGCCACATTGGTGGCCGCGCAGTGCGTCGAGGCTGCTGAGGCAATGGGGGCTGAGAGAGACCACCTAGCTTCTGTGGTTAGCTCAGCTGTCAATGTTCGCTCTCATGATGATATCACTACTCTTACCGCTGCAGCTGCAACAGCTCTAAGAGGAGCAGCTACCCTGAAGGCAAGAGCATTGAAAGAGGTATGGAACATTGCTGCAGTGACACCATTAGAGAAAGGCAGAGGAGGGATTGGAATTTCTGGCAAAGGTACTACAAATACCAATAACAATAACAGCAACAATACCAGCACAAGTGATAGTGGGGAGATTCTCAATGGAGAGAATTTTCTCGGCGTCTGCAGCCAAGAGCTACTTGCTAAGGGAACTGAATTGCTCAAACGAACCCGCAAAGGTGATCTTCACTGGAAAATAGTTTCTGTTTACATACATCGAACAGGCCAGGTGATGCTGAAAATGAAGAGCAAACATGTTGCAGGAACCATTACCAAAAAGAAAAAGAATGTTGTGCAAGATATTTGCACAGACTTACCAGCATGGCCAGGGAGACATCTGCTTGATGATGGCGAAAAGCGGAAATACTTTGGGTTGAAGACAGATGCAAGGGGTATTGTGGAGTTTGAGTGTAGAAATCAAAGGGAATATGATATCTGGACTCAAGGGGTCTCCAGGCTTCTTTCCATTGTTGCACAAAGACAAAACAGATTTGGAAACTGA 1533 0.4853 MEAKCSNINCRRPEFLPPPAGGTHLPESPRVPMEFLSRSWSASALEVCKALAPHQPPLHHLLPPSSKTTSNGSYTSSSSLIPEETGCGDSEEFPSSSLISTTSLSKNQFSFVSSATSQLVLERIMSQSAREQEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRASAAIGNGAAPSGPKTVGRWLKDRREKKKEETRTHNAQLHATISVAAVASAVAAIAAATAASSAPSKDERMAKTDMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNIAAVTPLEKGRGGIGISGKGTTNTNNNNSNNTSTSDSGEILNGENFLGVCSQELLAKGTELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSKHVAGTITKKKKNVVQDICTDLPAWPGRHLLDDGEKRKYFGLKTDARGIVEFECRNQREYDIWTQGVSRLLSIVAQRQNRFGN 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00180 510 MobiDBLite consensus disorder prediction 131 166 - -
Aip06g00180 510 PANTHER EXPRESSED PROTEIN 7 509 IPR040269 -
Aip06g00180 510 MobiDBLite consensus disorder prediction 353 375 - -
Aip06g00180 510 Pfam Auxin canalisation 26 346 IPR008546 -
Aip06g00180 510 Pfam Plant pleckstrin homology-like region 396 501 IPR013666 -
Aip06g00180 510 MobiDBLite consensus disorder prediction 349 375 - -
Aip06g00180 510 MobiDBLite consensus disorder prediction 58 97 - -
Aip06g00180 510 PANTHER AUXIN CANALIZATION PROTEIN 7 509 - -
Aip06g00180 510 MobiDBLite consensus disorder prediction 62 97 - -
Aip06g00180 510 MobiDBLite consensus disorder prediction 131 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00180 Aip-Chr6 1835146 1839017 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00180 - - aip:107645207 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00180 06 1835146 1839017 Aip06g00180 06 1835146 1839017 ECH
Aip06g00180 06 1835146 1839017 Aip02g02857 02 104696541 104697765 PCT