Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02857 ATGGCTGCTTCATCTGCACCAAGCAAGGATGAGAGGATGGCCAAGACTGGCATGGCTGTGGCCTCTACAGCCACATTGGTGGCCGCGCAGTGCGTCAAGGCTACTGAGGCAATAGGGGCTGAGAGTGATCACCTAGCTTCTGTGAGGAGCAGCTACCCTGAAGGCAAGAGCATTGAAAGAGGTATGGAACATTGCTGCAGTGACACCATTAAAGAAAGGCAGGGGAGGATTGGAATTTGTGGCAAAGGCGTCTGCAGCCAAGAGCTACTTGCTAAGGGAAGTGAATTACTCAAACGAACCCGCAAAGGTGATCTTCACTGGAAAATAGTTTTTGTTTACATACATCAAATAGGCCAGGTGATGCTGAAAATGAAGAGCAGACATGTTGCAGGATCCATTACCAAAAAGAAAAAGAATGCTATGCTAGATATTTGCAGAGACTTACTACTACTTGATAATGGCAAAAAGCGGAAATACTTTGGGTTGAAGACAGATACAAGGGGAATTGTAGAGATTGAGTGTAGAAATCAAGGGGACTATGATATCTGGACTCAAGGGGTCTCCAGGCTTCTTTCCATTGTTGCACAAAGACAAAACAGATTTGGAAACTGA 612 0.4542 MAASSAPSKDERMAKTGMAVASTATLVAAQCVKATEAIGAESDHLASVRSSYPEGKSIERGMEHCCSDTIKERQGRIGICGKGVCSQELLAKGSELLKRTRKGDLHWKIVFVYIHQIGQVMLKMKSRHVAGSITKKKKNAMLDICRDLLLLDNGKKRKYFGLKTDTRGIVEIECRNQGDYDIWTQGVSRLLSIVAQRQNRFGN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02857 203 PANTHER AUXIN CANALIZATION PROTEIN 2 52 - -
Aip02g02857 203 Pfam Plant pleckstrin homology-like region 95 194 IPR013666 -
Aip02g02857 203 PANTHER EXPRESSED PROTEIN 2 52 IPR040269 -
Aip02g02857 203 Pfam Auxin canalisation 2 52 IPR008546 -
Aip02g02857 203 PANTHER AUXIN CANALIZATION PROTEIN 82 202 - -
Aip02g02857 203 PANTHER EXPRESSED PROTEIN 82 202 IPR040269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02857 Aip-Chr2 104696541 104697765 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02857 - - aip:107645207 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00180 06 1835146 1839017 Aip02g02857 02 104696541 104697765 PCT