Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g04046 ATGTTGTTGCTTGGGAGGAAAACTATCTTCCTACAAATTCTTTGGAGTTTTTTCTTCATTGTTGGTATCAATTCCCAAAGGCCAAGAGAGTACCATTTTGTTGTGAGAGAAGCTAAGTACACAAGACTATGCTGCACCAAAACATTGTTGACTGTGAATGGAAGATTTCCAGGGCCAATTATCAAAGCGTACACAGGTGAAACAGTATATGTCAATGTCTATAACAAAGGGGATTTCAACATCACTTTGCACTGGCATGGAGTGAAGCAGCCAAGAAATCCATGGTCAGATGGCCCTGAATACATCACACAATGCCCTATCCAACCAGGAATGAAATTCAGGCAAAAGGTGATTTTTTCTTTTGAACAAGGGACATTATGGTGGCATGCACATAGTGATTGGGCAAGAGCCACTGTCCATGGACCTATCTTTGTGTATCCAAGAACATCCTACCCTTTTCCCAAGCCTTATGCAGAGGTTCCTATTGTATTTGGAGAATGGTGGAAGAGTGAAATCAAGGATGTTTATGAACAATTTGTTATAAGTGGAGGAAGCCCTATTAATTCTGATGCTCTCACTATCAATGGTCAACCTGGTGACTTTTTTCCTTGCTCAAGAGAAGAAACATTCAAGTTTAATGTAGATTTTGGCAAGACTTATCTGCTGAGGATTGTGAATGCTGCAATGAATGTAGTTCTCTTTTTCTCTGTTTACAAACACAGTCTCACTGTTGTTGGTGCTGATGCCGCCTACACCGAGCCATTAACAAGAGACTTCATATGCATAGCTCCAGGACAATCACTTGATGTTTTATTGCATGCAAATCAAGAACCTGATCACTACTACATGGCTGCAAGAGCATATTCAAGTTCCTCTATTCTTCCTTTTGATAACACCACAACCACAGCTAGAATCCACTACAATGGATATTACATTCCAACTTCATCACCTCCATTACCTTGTCTTCCTTACTACAATGACACAAATGCAGCTTTTGATTTCTTGGGAAGCCTTAGAGGCAAACCTGAGACATACCCTCATAAAGTCCCAACAATAATCACAACTCGTATCATTAGCACTATTTCTATCAACACATTCCCATGCCCTGAAGGCCAGACATATTCACAAACATGTGAAGGGCCAAATGGAACACGTTTAGCAGCTAGCATGAACAACATATCCTTTGAGTTACCAAACATTTCCATCTTGGATGCATATTATTACTACTTAAATGGTGTCTACAGTAATAATTTCCCTAGTTTTCCTCCTTTGGTATTCAACTTCACTGCAGAGTATTTGCCAATGATACTAGAGATACCAAAGAGAAGAACCATGGCTAGAGTTATAGAGTATGATTCAACAGTGGAAATTGTGTTTCAAGGGACAAACTTGGTTGCTGGGATAGATCATCCTATGCATATACATGGAACTAGCTTCTACATTGTTGGACGTGGACTTGGAAATTTTGATGAATATGAGGATCCAAAGACATACAATCTAATCGACCCTCCTCTTAGGAACACAGTTCTTGTGCCTATAAATGGTTGGGCTACTATAAGGTACAGAGCTGGTAACCCAGGAGTGTGGTTTGTGCATTGCCACTTAGAACGGCACCTGACTTGGGGAATGGAAACTGTGTTCATTGTGAAGAATGGAGAAGGATGCGATGAAAGTTTACTTCCTCCACCTCCAGATCTGCCTCCCTGTTGA 1710 0.4058 MLLLGRKTIFLQILWSFFFIVGINSQRPREYHFVVREAKYTRLCCTKTLLTVNGRFPGPIIKAYTGETVYVNVYNKGDFNITLHWHGVKQPRNPWSDGPEYITQCPIQPGMKFRQKVIFSFEQGTLWWHAHSDWARATVHGPIFVYPRTSYPFPKPYAEVPIVFGEWWKSEIKDVYEQFVISGGSPINSDALTINGQPGDFFPCSREETFKFNVDFGKTYLLRIVNAAMNVVLFFSVYKHSLTVVGADAAYTEPLTRDFICIAPGQSLDVLLHANQEPDHYYMAARAYSSSSILPFDNTTTTARIHYNGYYIPTSSPPLPCLPYYNDTNAAFDFLGSLRGKPETYPHKVPTIITTRIISTISINTFPCPEGQTYSQTCEGPNGTRLAASMNNISFELPNISILDAYYYYLNGVYSNNFPSFPPLVFNFTAEYLPMILEIPKRRTMARVIEYDSTVEIVFQGTNLVAGIDHPMHIHGTSFYIVGRGLGNFDEYEDPKTYNLIDPPLRNTVLVPINGWATIRYRAGNPGVWFVHCHLERHLTWGMETVFIVKNGEGCDESLLPPPPDLPPC 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g04046 569 PANTHER MULTI-COPPER OXIDASE 35 569 IPR045087 -
Aip05g04046 569 PANTHER LACCASE-15 35 569 - -
Aip05g04046 569 CDD CuRO_1_LCC_plant 31 147 IPR034288 GO:0005507
Aip05g04046 569 ProSitePatterns Multicopper oxidases signature 2. 532 543 IPR002355 GO:0005507
Aip05g04046 569 ProSitePatterns Multicopper oxidases signature 1. 527 547 IPR033138 -
Aip05g04046 569 Pfam Multicopper oxidase 442 552 IPR011706 GO:0005507|GO:0016491
Aip05g04046 569 CDD CuRO_3_LCC_plant 413 552 IPR034289 GO:0005507
Aip05g04046 569 Gene3D - 158 343 IPR008972 -
Aip05g04046 569 SUPERFAMILY Cupredoxins 153 339 IPR008972 -
Aip05g04046 569 CDD CuRO_2_LCC_plant 160 307 IPR034285 -
Aip05g04046 569 Pfam Multicopper oxidase 35 149 IPR011707 GO:0005507
Aip05g04046 569 SUPERFAMILY Cupredoxins 373 568 IPR008972 -
Aip05g04046 569 Pfam Multicopper oxidase 159 309 IPR001117 -
Aip05g04046 569 SUPERFAMILY Cupredoxins 26 170 IPR008972 -
Aip05g04046 569 TIGRFAM laccase: laccase 29 569 IPR017761 GO:0046274|GO:0048046|GO:0052716
Aip05g04046 569 Gene3D - 372 569 IPR008972 -
Aip05g04046 569 Gene3D - 20 147 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g04046 Aip-Chr5 148653290 148655977 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g04046 K05909 - gmx:100817468 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g04046 05 148653290 148655977 Aip09g03208 09 137730938 137733133 PCT