Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03774 ATGTGTCAGGTAACAACATCTCATGACCTAAATTGCAATCTCAACTCTCCAAACATGAACACCAACACATTGACACTACCATTGATCTCCAAAGGAGGAGCAGCAGAAGAAGAAGAAGAAGAATCTCAATCAGATAATAGTAACATCTCAGAGTCATTAAAGGAATTAATATCAATATCAAAGATAGCATTCCCAATGATACTGACAGGGCTATTACTGTATTGCCGTTCAATGATCTCCATGCTGTTCTTAGGACAACTTGGGGAGCTAGCCTTAGCAGGAGGCTCACTAGCACTGGGCTTCGCCAACATCACCGGCTACTCGATCCTCTCCGGCCTAGCCGTGGGAATGGAACCCATCTGTGGACAAGCCTTTGGTGCCAAGAAATTCAGCCTTTTAGGCCTATCCTTACAAAGAACCATTCTCTTGCTTCTCTTGACTTCAATCCCAATATCACTCCTCTGGCTCCACATGAAGCAAATCCTTCTTCTTTGTAACCAAGATGAGGCCATAGCCATAGAAGCACAATCATATCTTCTATTCTCAATCCCTGACCTCATAGCACAGTCTTTTCTTCACCCTTTGAGGATTTATCTCAGAACACAGTCCATTACTCTGCCTCTAACACTCTGTGCCTCTTTCTCAATTCTCCTCCACATACCAATCAACTATCTCCTTGTTTCTCACCTCAACCTTGGAATCAAAGGCGTTGCGCTTAGTGGGGTGTGGACAAATTTCAACCTTGTTGTTTCTTTGCTTCTCTATATAGTCTTCTCAGGAACTCACTCCAAGACATGGGGTGGATTCTCTTCTGAGTGCTTCACAAAATGGAAGCAGCTCTTGAATTTGGCAATCCCAAGCTGCATTTCTGTGTGCCTTGAATGGTGGTGGTACGAGATCATGATCTTGCTGTGTGGTCTGTTATTGAATCCAAGAGCAACCGTAGCTTCAATGGGGATTCTCATCCAAACAACATCGCTGCTCTACATTTTCCCATCTTCTCTGAGCTTCAGTGTTTCCACAAGGGTAGGGAACAAGCTAGGAGCACAAGAGCCTTCAAAGGCGAAACTTTCGGCCATTGTAGGACTCTCTTGCAGCTTCATTTCTGGTGTATCAGCACTGGCTTTTGCTCTAACTGTTAGGAACATGTGGGCAAGCATGTTCACAAGGGACAAAGAGATTATAGCATTGACATCAATGGTGTTACCAATTATAGGTCTTTGTGAACTTGGTAACTGTCCTCAAACCACAGGTTGTGGTGTTCTTAGAGGGACAGCAAGGCCTAAAACAGGTGCTAACATCAACTTAGGTTGCTTCTATCTTGTGGGAATGCCTGTGGCAATTTGGTTAGGCTTCTTTGCTGGCTTTGATTTTCAAGGTTTGTGGCTTGGCCTACTTGCTGCTCAAGGCTCTTGTGCTGTGTCCATGTTGGTTGTTCTTCTTAGAACTGATTGGGATTTAGAAGCTCAAAGGGCTAAGAAATTAACAGCTTCATCAGCATCTGTTGGAGGAGTTTGCAATGATGATGATGATAAGAACAAAGATGTTTATCATCATCATTATGATGCAGACAACAAGTTACCCAAACCTCAAAGCAAGGAAGATTCTTTCTCATCTAATAATTCAGATGAACACCAACACTCTTATTGG 1650 0.4327 MCQVTTSHDLNCNLNSPNMNTNTLTLPLISKGGAAEEEEEESQSDNSNISESLKELISISKIAFPMILTGLLLYCRSMISMLFLGQLGELALAGGSLALGFANITGYSILSGLAVGMEPICGQAFGAKKFSLLGLSLQRTILLLLLTSIPISLLWLHMKQILLLCNQDEAIAIEAQSYLLFSIPDLIAQSFLHPLRIYLRTQSITLPLTLCASFSILLHIPINYLLVSHLNLGIKGVALSGVWTNFNLVVSLLLYIVFSGTHSKTWGGFSSECFTKWKQLLNLAIPSCISVCLEWWWYEIMILLCGLLLNPRATVASMGILIQTTSLLYIFPSSLSFSVSTRVGNKLGAQEPSKAKLSAIVGLSCSFISGVSALAFALTVRNMWASMFTRDKEIIALTSMVLPIIGLCELGNCPQTTGCGVLRGTARPKTGANINLGCFYLVGMPVAIWLGFFAGFDFQGLWLGLLAAQGSCAVSMLVVLLRTDWDLEAQRAKKLTASSASVGGVCNDDDDKNKDVYHHHYDADNKLPKPQSKEDSFSSNNSDEHQHSYW 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03774 550 MobiDBLite consensus disorder prediction 511 531 - -
Aip05g03774 550 PANTHER MULTIDRUG RESISTANCE PROTEIN 39 509 - -
Aip05g03774 550 CDD MATE_eukaryotic 55 491 IPR045069 GO:0042910|GO:1990961
Aip05g03774 550 MobiDBLite consensus disorder prediction 511 550 - -
Aip05g03774 550 Pfam MatE 65 225 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip05g03774 550 Pfam MatE 286 448 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip05g03774 550 TIGRFAM matE: MATE efflux family protein 65 462 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip05g03774 550 PANTHER PROTEIN DETOXIFICATION 39 509 - -
Aip05g03774 550 MobiDBLite consensus disorder prediction 532 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03774 Aip-Chr5 145875851 145877500 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03774 K03327 - gmx:100788027 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03774 05 145875851 145877500 Aip09g03988 09 146321586 146323348 ECH
Aip05g03774 05 145875851 145877500 Aip05g03774 05 145875851 145877500 ECH