Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03101 ATGAGTAGAAAGAAAAGGGGACTTTTGTTCAACATAGAAGAAGTTGCAGTGGACTTCTTCTTCAACCATCTCTTGAAGGAGAAGCCATCAATTCCATTCTTCATTCCTCTGGTTTTGGTTGCTTGGGCTATTGAGAAATGGATGTTCTCTTTCTCCACCTGGGTTCCCATTCTTCTTGTTGTGTGGATAGCTATACAGTATGGTAGGTATCAACGGAAACTACTTGTTGAGGACTTGGATAAGAAATGGCAACGAATCATACTGAACACATCGCCGATCACTCCGTTGGAGCATTGCGAGTGGCTGAATAAGCTCTTGACTGAAATCTGGTCCAGCCATTATAACCCAAAGCTTTCAATAAGGTTATCGGCGATAGTTGAGAAACGTTTAAAGCTCCGGAAGCCAAGACTTATAGAAAGAGTCGAGCTGCAGGAGTTTTCATTGGGTTCATGCCCTCCTAGTGTGGGTCTTCAAGGGATGCGATGGTCAACTATCGGTGATCAGCGAGTCCTACAACTGGGTTTGGATTGGGACACAAATGAAATGAGCATTTTGATGCTTGCGAAGCTTGCAAAGCCATTGATCGGAACTGCTCGGATTGTGATTAATAGTCTTCATATCAAGGGTGATCTTCTATTTACACCAATCCTGGATGGAAAAGCACTTTTGTATTCATTTGTATCAACTCCTGAGGTGAGAATAGGAATCGCCTTTGGAAGCGGTGGAAGCCAGTCACTTCCTGCCACTGAATGGCCCGGTGTTTCTTCTTGGCTGGAAAAGCTTTTTACTGACACCTTGGTTAAGACCATGGTGGAACCTCGGCGCCGCTGTTTTACTTTGCCTGCTGTTGATTTGAGGAAGAAGGCTGTTGGTGGCATTATATATATTAGAGTGATTTCGGCTAGTAAACTTTCAAGGAGTTGCTTCAAGGGGGGATCTAGGAGGCCTCAAAATGGTACAACCAATAGTTTCTCGGTGGACAGTTTTGATGACAAGGACCTACAAACATTTGTCGAGGTAGAAGTTGGGGACTTAATCAGGAGAACAGATGTTAGACTTGGATCAACCCCTCGATGGGATGCACCATTTAATATGGTTTTACATGATAACGCTGGAAACCTTCGTTTCAATCTTTATGAGTCTCATCCCAACAATATCAAGTGTGACTACCTAGCAAGTTGTGAAATCAAGATGAGGCATGTTGAAGATGATTCAACAATATTCTGGGCAATAGGACCCGATTCTGGGGTCATAGCAAAGCAAGCACAATTTTGTGGAGATGAAGTTGAAATGATGGTCCCATTTGAGGGGGCTAACCCCGGGGAGTTGAAGGTCAGCATTGTAGTAAAAGAGTGGCAATATTCTGATGGTACGCATAGCTTGAACAGTCTCCGGTCGAGTTCTCAGTCATCAGTTAGTGGATCATCAAATATTCAGTTAAGAACTGGAAGGAAACTTAACATAACTGTTATGGAAGGAAAGGATCTCGCTGCAAAAGATAAATCTGGAAAGTTTGATCCATATGTCAAACTTCAGTATGGTAAGACTGTCCTGAAAACAAAGACTGCCCATGGTTCGAATCCTGTATGGAACCAGACGTTTGAATTCGATGAGGTTAGTGGCGGTGACTACTTAAAAGTAAAAGGCTTCAGTGAAGAAATTTTCGGAGACGAAAACATTGGTAGTGCAAATGTAAATTTGGAAGGGCTGGTAGATGGAACAGTCAGGGATGTATGGATACCTCTAGAAAGAGTGCGTTCTGGAGAATTAAGACTTCAAATACAAGCAGTCAGGCTCGACGACCAAGAAGGATCAAATTCAAGGGGATCAGCTCCAGGCCCGGCCAATGGTTGGATAGAACTTGTTCTAATTGAGGGAAGGGATCTTGTTGCCGCTGATCTACGAGGCACAAGCGATCCATTTGTGAGGGTGCAATATGGAAACATAAAGAAAAAGACGAAGGTTATATACAAAACTCTTAACCCTCAGTGGAACCAGACCTTAGAGTTCCTCGATGATGGTAGTCCCCTTGTACTCTATGTGAAGGACCACAATGCATTGTTGGCCGCATCAAGCATAGGTGAATGTGTCGTCGAATATCAAAGGCTGCCTCCAAATGAAACGGCCGACAAGTGGATACCCCTCCAAGGTGTGAAAAGGGGAGAGATTCACATCCAAATTACTAGAAAAGTTCCGGAGTTGCAAAAGAGAAATAGTATAGATTCTGAACCTTCCTTGAGCAAATTACACCAAATTCCGAACCAGATTAAACAGATGATGATCAAGTTCCGGTCTTTAATAGAGGACGGAAACCTCGACGGGCTATCAGAAGCTTTGAGTGAGCTAGAAACTTTAGAGGATACACAAGAAGGTTACATAGTCCAATTGGAAACTGAGCAAATGATGCTTCTCAGCAAAATAAGGGAGCTAGGTCAAGAGATGATTAATTCTTCTCCTTCAATGAGTCGAAGATCTTCTGGAAGTGGAAGCTGA 2493 0.432 MSRKKRGLLFNIEEVAVDFFFNHLLKEKPSIPFFIPLVLVAWAIEKWMFSFSTWVPILLVVWIAIQYGRYQRKLLVEDLDKKWQRIILNTSPITPLEHCEWLNKLLTEIWSSHYNPKLSIRLSAIVEKRLKLRKPRLIERVELQEFSLGSCPPSVGLQGMRWSTIGDQRVLQLGLDWDTNEMSILMLAKLAKPLIGTARIVINSLHIKGDLLFTPILDGKALLYSFVSTPEVRIGIAFGSGGSQSLPATEWPGVSSWLEKLFTDTLVKTMVEPRRRCFTLPAVDLRKKAVGGIIYIRVISASKLSRSCFKGGSRRPQNGTTNSFSVDSFDDKDLQTFVEVEVGDLIRRTDVRLGSTPRWDAPFNMVLHDNAGNLRFNLYESHPNNIKCDYLASCEIKMRHVEDDSTIFWAIGPDSGVIAKQAQFCGDEVEMMVPFEGANPGELKVSIVVKEWQYSDGTHSLNSLRSSSQSSVSGSSNIQLRTGRKLNITVMEGKDLAAKDKSGKFDPYVKLQYGKTVLKTKTAHGSNPVWNQTFEFDEVSGGDYLKVKGFSEEIFGDENIGSANVNLEGLVDGTVRDVWIPLERVRSGELRLQIQAVRLDDQEGSNSRGSAPGPANGWIELVLIEGRDLVAADLRGTSDPFVRVQYGNIKKKTKVIYKTLNPQWNQTLEFLDDGSPLVLYVKDHNALLAASSIGECVVEYQRLPPNETADKWIPLQGVKRGEIHIQITRKVPELQKRNSIDSEPSLSKLHQIPNQIKQMMIKFRSLIEDGNLDGLSEALSELETLEDTQEGYIVQLETEQMMLLSKIRELGQEMINSSPSMSRRSSGSGS 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03101 830 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 330 406 IPR035892 -
Aip05g03101 830 PANTHER PLANT SYNAPTOTAGMIN 1 823 - -
Aip05g03101 830 ProSiteProfiles C2 domain profile. 466 580 IPR000008 -
Aip05g03101 830 Pfam C2 domain 485 582 IPR000008 -
Aip05g03101 830 Pfam C2 domain 293 404 IPR000008 -
Aip05g03101 830 Pfam C2 domain 619 715 IPR000008 -
Aip05g03101 830 Gene3D C2 domain 279 449 IPR035892 -
Aip05g03101 830 Gene3D C2 domain 606 730 IPR035892 -
Aip05g03101 830 Gene3D C2 domain 469 600 IPR035892 -
Aip05g03101 830 ProSiteProfiles C2 domain profile. 600 713 IPR000008 -
Aip05g03101 830 PANTHER OS01G0128800 PROTEIN 1 823 - -
Aip05g03101 830 SMART C2_3c 618 712 IPR000008 -
Aip05g03101 830 SMART C2_3c 485 579 IPR000008 -
Aip05g03101 830 SMART C2_3c 293 410 IPR000008 -
Aip05g03101 830 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 484 595 IPR035892 -
Aip05g03101 830 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 95 281 IPR031468 GO:0008289
Aip05g03101 830 CDD C2 619 715 - -
Aip05g03101 830 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 612 728 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03101 Aip-Chr5 134365050 134374078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03101 618 727 Lipid Metabolism Gene Families AT1G51570 30.328 1.77e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03101 - - gmx:100789237 1391.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03101 05 134365050 134374078 Aip05g03101 05 134365050 134374078 ECH
Aip03g02363 03 37645139 37649830 Aip05g03101 05 134365050 134374078 PCT