Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02363 ATGCTCAACTCCTCGCCCGTTACACCATTGGAACACTGTGAATGGTTGAATAAGCTCTTGACTCAAGTCTGGCCCAACTATTTTAATCCAAAGCTTTCAAGAAGGTTATCCGCTATAGTGGAGAAGCGGTTAAAGCTCCGGAAACCGAGCCTTATAGAGAAAGTTGACCTGCGTGAGTTCTCGCTAGGATCATGCCCTCCAAGTTTGGGTCTTCAAGGGGTGCGGTGGTCAACTTCTGGTGATCAGCGGATCTTGAACATGGGTTTTGATTGGGACACTAGTGACATGAGTATTTTGATGCTTGCCAAGCTTGCCAAGCCATTGATGGGAACTACCCGAATTATGATTAACAGTCTTCATATCAAGGGTGATCTCCTCATTACACCAATTCTAGATGGAAAAGCCCTTCTGTATTCATTTTCATCAAAACCTGAGGTGAGAATTGGAATTGCGTTTGGAAGTGGCGGAACAGAGGTGCCTGGTGTTTCTTCTTGGCTGGAGAAACTTTTTACCGACACTTTGCTTAAAACCATGGTGGAACCTCGGCGCCGATGCTTCTCTTTGCCGGCAGTGAATTTAAGGAAAAGAGTTGTTGGAGGCATTATATATGTTACAGTGATTTCAGCCAACAAACTTTCTAGGAGTTGCTTTAAGGGAAGCCCATCTTTGAGGCAGCAAAATGGCTGCTTGGAAGAAAAATTGGATGACAAGGACCTGCAGACATTTGTGGAAGTAGAAGCAGAGGAATTGACAAGGAGGACAGGTGTGAGCCGAGGTTCAACACCAACATGGGATGCAACGTTTAATATGGTATTACATGACAGTACAGGAATTGTTCGCTTTAATCTTTATGAGTGCCTTCCCAGCAGTGTGAAGTATGACTACCTAGCAAGTTGTGAAATCAAGATGAGGCATGTTGAAGATGATTCGACAATAATGTGGGCAACTGGGCCGAACTCTGGTGTCATAGCAACACATGCAAAAGATTGTGGAGATGAAATCGAAATGACTGTTCCATTTGAGGGGTCCAACTCTGGAGAGTTGAAGGTGAGAATTGTAGTAAAAGAATGGCAATTTGCTGATGGTTCACATAGCTTGAACAGCCTCAGTACTAGCTCTCAGCCACCACTAAGTGAATCATCAAATCTGCAGTCAAAAACTGGAAGGAAACTTAGGATAACTGTTGTTGAAGCAAAAGATCTAGCTACAAAAGACAAATTTGGAAAAGTTGATACATATGTCAAACTGCAGTATGAAAAGACTATCCAGAAAACCATGAATGCTCAAACTCCAAATCCTATTTGGAATCAATCATTTGAATTTGATGAGACGGGTGGTGATGAATACCTAAATGTAAAGTGCTTTACTAATGAAGTTTTTGGAGATGAAAATATTGGTAGTGCTCATGTAAATTTGGAGGGACTAGTAGACGGCTCAGTCAAGGATGTGTGGATCCCTCTGGAAGGAGCGAGTTCTGGCGAGTTAAGACTTAAGATAGAAGTAGTTAAGGTGAATGACCAAGAAGGATCAAGGGATACAGCTTCGAGCTCACACAAAGGTTGGATAGAACTAGTTGTGATTGAAGCAAGGGATCTTATTGCTGCTGATCTTAGAGGGACAAGTGATCCTTATGTGAGGGTAGACTATGGAAACTTGAAGAAAAGGACAAAGGTTATTCCCAAGACTTTGAATCCTCAATGGAACCAGACCTTAGACTTCCTGGACGATGGCAGTCTCCTTGTACTGCGTGTTAAGGACCATAATGCTTTACTGCCCACATCAAGCATCGGTGAATGTGTTGTGGAATATCAAATGTTGCCTCCAAACCAGATGGTTGACAAGTGGATACCTCTCCAAGGGGTGAAAAGTGGCGAGATCCACATCCAAATTACAAGAAATGTCCCTGAGATGAAAATGAGACAAGTTGTGGATTCTGAACCTTCGTTAAGCACATTGCACCAAATTCCTACCCAGATGAAAGAGATGATGATGAAGTTTCGATCGTTAATAGATGACGGAAATGTTGAAGGACTGTCTAGGATTTTGAGTGAGCTAGAAACTCTGGAGGACACTCAGGAAGGATATATAGCGCAGCTGGAGACACAGCAAATGATGCTTCTCAGCAAAATAAAGGAATTAGGACAGCAGATCATCAATTCTTCTCCATCCCTTCAGAATTAA 2181 0.426 MLNSSPVTPLEHCEWLNKLLTQVWPNYFNPKLSRRLSAIVEKRLKLRKPSLIEKVDLREFSLGSCPPSLGLQGVRWSTSGDQRILNMGFDWDTSDMSILMLAKLAKPLMGTTRIMINSLHIKGDLLITPILDGKALLYSFSSKPEVRIGIAFGSGGTEVPGVSSWLEKLFTDTLLKTMVEPRRRCFSLPAVNLRKRVVGGIIYVTVISANKLSRSCFKGSPSLRQQNGCLEEKLDDKDLQTFVEVEAEELTRRTGVSRGSTPTWDATFNMVLHDSTGIVRFNLYECLPSSVKYDYLASCEIKMRHVEDDSTIMWATGPNSGVIATHAKDCGDEIEMTVPFEGSNSGELKVRIVVKEWQFADGSHSLNSLSTSSQPPLSESSNLQSKTGRKLRITVVEAKDLATKDKFGKVDTYVKLQYEKTIQKTMNAQTPNPIWNQSFEFDETGGDEYLNVKCFTNEVFGDENIGSAHVNLEGLVDGSVKDVWIPLEGASSGELRLKIEVVKVNDQEGSRDTASSSHKGWIELVVIEARDLIAADLRGTSDPYVRVDYGNLKKRTKVIPKTLNPQWNQTLDFLDDGSLLVLRVKDHNALLPTSSIGECVVEYQMLPPNQMVDKWIPLQGVKSGEIHIQITRNVPEMKMRQVVDSEPSLSTLHQIPTQMKEMMMKFRSLIDDGNVEGLSRILSELETLEDTQEGYIAQLETQQMMLLSKIKELGQQIINSSPSLQN 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02363 726 CDD C2 522 618 - -
Aip03g02363 726 Gene3D C2 domain 199 351 IPR035892 -
Aip03g02363 726 ProSiteProfiles C2 domain profile. 371 485 IPR000008 -
Aip03g02363 726 PANTHER PLANT SYNAPTOTAGMIN 1 725 - -
Aip03g02363 726 MobiDBLite consensus disorder prediction 365 385 - -
Aip03g02363 726 Coils Coil 696 716 - -
Aip03g02363 726 PANTHER OS01G0128800 PROTEIN 1 725 - -
Aip03g02363 726 Pfam C2 domain 522 618 IPR000008 -
Aip03g02363 726 Pfam C2 domain 201 309 IPR000008 -
Aip03g02363 726 Pfam C2 domain 390 487 IPR000008 -
Aip03g02363 726 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 194 311 IPR035892 -
Aip03g02363 726 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 9 189 IPR031468 GO:0008289
Aip03g02363 726 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 516 631 IPR035892 -
Aip03g02363 726 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 389 504 IPR035892 -
Aip03g02363 726 CDD C2 202 310 - -
Aip03g02363 726 SMART C2_3c 390 484 IPR000008 -
Aip03g02363 726 SMART C2_3c 521 615 IPR000008 -
Aip03g02363 726 SMART C2_3c 201 315 IPR000008 -
Aip03g02363 726 ProSiteProfiles C2 domain profile. 503 616 IPR000008 -
Aip03g02363 726 Gene3D C2 domain 374 503 IPR035892 -
Aip03g02363 726 Gene3D C2 domain 504 633 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02363 Aip-Chr3 37645139 37649830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02363 391 655 Lipid Metabolism Gene Families AT3G57880 26.646 2.32e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02363 - - ccaj:109803570 1125.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02363 03 37645139 37649830 Aip05g03101 05 134365050 134374078 PCT