Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01891 ATGACTAATACCGTGTTGGTGCAGGGCTGTTGCTTCATTCATAACATCATCAAAATGAAGAAATTGTATGGAGGAGTCTTAATTGCTTCATTGTTTATGCTGTTTATGCTTATGATCCTGCGATATGGGGTCATGAAAAATCCTATCAGTGAAGCTTATCCAACAATACCTGTCTCCCTTAATGTTAATGGTACTAATCCTCTAGAATGGATAAAACCTATGGCTCCTCCTGCTGTTCGCAATCCAGCTGTTACATCTCAAGTTATTTCTGCTGATATTTTAGTATCTAGCCTCTTTTTGGGGAGCAACTTTTCGAAAGAAGAGCAGCAAGCTCTGCAGACACGGAACCACTTGAAACACTTACTTGATCATGCTCAGGGTTTACCTAATGCAGTAGAAGCTATCAAGGAAGCTGCGGGTGTATGGAATAGTCTTATTTCTTCAGTTGAAGAGCAAAGACAAGGTTATGCAAATGATAGTTCTAGAACAAAAGAGAAACAGTGTCCCCATTTTCTTAACAATATGAGTTCCCCTGAACTCGGTAACGGTAGTTATGAACTGCAAGTACCCTGTGGACTGACACAGGGTTCTTCCATTACTGTAATTGGCATTCCAAATGGTCTTCTTGGCAATTTTCGGATTGACTTGACTGGAGAACCACTTCCTGGGGAGCCTGACCCCCCTATAATTTTGCACTATAATGTTAGGCTTCATGGTGACAAAATCACTGAAGATCCTGTAATTGTCCAAAACTCCTGGACAGCAGCTCATGATTGGGGAGGAGAGGAGCGTTGCCCATCACCCACTCCTGAAAAGGTTAAGAAAGTTGATGACTTGGAAGAGTGCAATAAGATTGTAGGGAAGAACATAAGCCAACATTACATGGCTGGCATGCATTCCTACACTTCAAGGCAATCTTTAGCAACAGAAGAACACTCAAAACAGAGTAAATACTTTCCTTTTAAGCAAGGTTTACCTTTTGTTGCAACTCTTCGAGTGGGATCAGAGGGAATTCAGATGACAGTTGATGGAAAGCACATAACTTCATTCGCTTTCCGTGAAACTTTGGAGCCATGGGTTGTCAATGAGATACGAATTTCAGGGGACATCAAGTTAATTTCTGTTCTTGCCAGTGGTCTGCCCACATCAGAGGATTCAGAGCATATTGTCGATCTAGAATCACTAAAAGCAAGTCCTGTATCAGCACAGACCCCATTAGATCTCTTCATTGGTGTCTTCTCTACTGCGAACAATTTCAAGCGTCGGATGGCTGTTAGAAGAACCTGGATGCAATACAATGCAGTTCGAACAAACAAATCAGCCGTGCGCTTCTTTGTTGGTTTGCACAAGAGCCAAATAGTAAATGAAGAACTATGGAAAGAAGCACAAACCTATGGAGACATACAGCTGATGCCATTTGTTGACTACTACAGTCTTATAACCTGGAAGTCTTTAGCTATTTGCATTTTTGGGGTAACGTCTAATATTTTTCTTTTAAGTTGGAGAGTCTCCCCAACTTCATTGACATGA 1530 0.4137 MTNTVLVQGCCFIHNIIKMKKLYGGVLIASLFMLFMLMILRYGVMKNPISEAYPTIPVSLNVNGTNPLEWIKPMAPPAVRNPAVTSQVISADILVSSLFLGSNFSKEEQQALQTRNHLKHLLDHAQGLPNAVEAIKEAAGVWNSLISSVEEQRQGYANDSSRTKEKQCPHFLNNMSSPELGNGSYELQVPCGLTQGSSITVIGIPNGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLHGDKITEDPVIVQNSWTAAHDWGGEERCPSPTPEKVKKVDDLEECNKIVGKNISQHYMAGMHSYTSRQSLATEEHSKQSKYFPFKQGLPFVATLRVGSEGIQMTVDGKHITSFAFRETLEPWVVNEIRISGDIKLISVLASGLPTSEDSEHIVDLESLKASPVSAQTPLDLFIGVFSTANNFKRRMAVRRTWMQYNAVRTNKSAVRFFVGLHKSQIVNEELWKEAQTYGDIQLMPFVDYYSLITWKSLAICIFGVTSNIFLLSWRVSPTSLT 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01891 509 PANTHER - 84 492 - -
Aip05g01891 509 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 185 378 IPR001079 GO:0030246
Aip05g01891 509 Pfam Galactosyltransferase 420 492 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aip05g01891 509 SMART galectin_3 183 378 IPR001079 GO:0030246
Aip05g01891 509 SMART Gal_bind_lectin_2 189 377 IPR001079 GO:0030246
Aip05g01891 509 Pfam Galactoside-binding lectin 185 376 IPR001079 GO:0030246
Aip05g01891 509 SUPERFAMILY Concanavalin A-like lectins/glucanases 185 378 IPR013320 -
Aip05g01891 509 Gene3D - 179 376 - -
Aip05g01891 509 CDD GLECT 185 375 IPR001079 GO:0030246
Aip05g01891 509 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 84 492 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01891 Aip-Chr5 54744613 54750214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01891 19 499 Glycosyltransferase AT1G26810 61.145 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01891 K14413 - gmx:100782548 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01891 05 54744613 54750214 Aip05g01891 05 54744613 54750214 ECH
Aip01g02982 01 132168291 132172108 Aip05g01891 05 54744613 54750214 PCT