Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02982 ATGTGTCTACAGAAACGGCTACATTTAATTCAAGGTTTGCTGAAAATGAAGAAGTGGTATGGAGGCTTGTTGATCATGACTCTAGTTATGATGTTGGTTTTCCTGTACGGGTATAAAGGATTTCAGCCACAGAAACAGTCAGCAAAACAATCAGCATATAATTTCTTTCATAACCAACAGGTAGTAGATGATTATGTTAACGGTGGTAGCAGTGCTCCTCCTGTTAACTCATCTAAGGTGGAACAGAAAAGAGTACCGCTGGTACCAAGAGAAAGGCCACATTTGATTCATGTCGACGGGCTTGATGATCTGTATGGCATGAAAAATTTAACTGAAAGAGAGATGAATACTGTGATTGTATGGTCTTACTTGCATTCCTTGCTTTCGAGGTCGGATGCGCTGCCTGAAACTGCTCAAGGAGTTAAAGAAGCTTCTGTAACATGGAAAAAACTGCTGTCTATGGTTGAAGAAGACAAAGTTTCTAGGATTAATAATACAGAAAGCCCAGAAAATCAAAACTGCCCATTCTCTGTGACCACATTTGGTAAGACAATATCAGGCAGTGGAATCACTCTCGAGCTCCCTTGCGGTTTGGTTGAAGATTCTTCTATTACAATTATTGGCATCCCTAATGGGAATAGCAGCTTTCAAATTGACCTTATTGGACAAGAGCTTGAAGAGAAGCCAAATCCTCCAATCATCTTATATTACAACATAAGAGTTCCTCAAGATAACATGACTGAGGAACCATATATAGTTCAAAATACATGGACTAGTAATTTTGGGTGGGGAAAAGAGGAAAGGTGTCCTGCTCGCGGTTCTGCTAACCAGAAAGTTGATGGATTTGCTCTCTGCAATGTACAAGTCGGAAGTAACAACGAAGACAATGTAAATGTGGGTCAACCTACTAGTGATATAACTGCTAATGTTTCCTCAGAAAGTGCACATAGAACTGGTAATTTCCCCTTTGCTGAGGGGAATCCTTTCACTGCCACATTGTGGGTTGGTTCAGAGGGATTTCATATGACTGTTAATGGAAGGCATGAAACTTCTTTTGCGTACAGGGAGAAGCTTGAACCATGGCTAGTCAACAATGTTAAAGTAGCAGGCAGCCTAAATCTCTTATCTGTCCTGGCAAAAGGCTTACCCGTTATGGAAGATAGCGATTTAGTTGATGTTGATAAATTGAAGGCTCCTTCTATCACCAGGAAAAAGCTTGTTTTGTTGATTGGAGTGTTCTCTACTGGAAATAACTTTGAGCGCCGAATGGCGCTGAGGAGGTCTTGGATGCAATATGAGGCTGTACGTTCTGGAGAAGTTGCTGTCCGATTTTTCATTGGGCTTCACAAAAACAATAGAGTTAACTTTGAGTTGTGGAGTGAATCTCAAGCATATGGGGATATTCAATTAATGCCATTTGTTGATTATTATAGTTTGATTACTTTGAAGACAATTGCAATTTGCATTATGGGGACTAAAGTCATGCCATCTAAATACATCATGAAAACAGATGATGATGCTTTTGTTAGGATAGATGAAGTGCTTTCTAGCCTCAAAGGAAAGCCATCAAATGGTCTTTTGTTCGGCCTCATCTCTTCTAAATCGTCACCTGAGAGGGATAAAGAAAGCAAATGGTACATCAGTGAGAAGGAATGGCCATATGATACATACCCACCATGGGCTCATGGTCCTGGCTATGTAATCTCCCGAGACATAGCGAAATTCATTGTCAATGGCCACCAGGAAAGAAAACTCCAGCTCTTTAAATTAGAAGATGTTGCCATGGGAATATGGATTGAACAATTCAAGAATGGTGGCAAAGAAGTTCATTATGAAAATGATGAGAGGTTTTACAATGTTGGATGTGAATCAAATTATGTACTTGCCCATTATCAAAGCCCACGGTTGGTGCTGTGCCTTTGGGATAAACTGCAAACAGAACATCAACCAAGATGCTGTGAGTAG 1965 0.4031 MCLQKRLHLIQGLLKMKKWYGGLLIMTLVMMLVFLYGYKGFQPQKQSAKQSAYNFFHNQQVVDDYVNGGSSAPPVNSSKVEQKRVPLVPRERPHLIHVDGLDDLYGMKNLTEREMNTVIVWSYLHSLLSRSDALPETAQGVKEASVTWKKLLSMVEEDKVSRINNTESPENQNCPFSVTTFGKTISGSGITLELPCGLVEDSSITIIGIPNGNSSFQIDLIGQELEEKPNPPIILYYNIRVPQDNMTEEPYIVQNTWTSNFGWGKEERCPARGSANQKVDGFALCNVQVGSNNEDNVNVGQPTSDITANVSSESAHRTGNFPFAEGNPFTATLWVGSEGFHMTVNGRHETSFAYREKLEPWLVNNVKVAGSLNLLSVLAKGLPVMEDSDLVDVDKLKAPSITRKKLVLLIGVFSTGNNFERRMALRRSWMQYEAVRSGEVAVRFFIGLHKNNRVNFELWSESQAYGDIQLMPFVDYYSLITLKTIAICIMGTKVMPSKYIMKTDDDAFVRIDEVLSSLKGKPSNGLLFGLISSKSSPERDKESKWYISEKEWPYDTYPPWAHGPGYVISRDIAKFIVNGHQERKLQLFKLEDVAMGIWIEQFKNGGKEVHYENDERFYNVGCESNYVLAHYQSPRLVLCLWDKLQTEHQPRCCE 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02982 654 Gene3D - 397 623 - -
Aip01g02982 654 Pfam Galactoside-binding lectin 191 378 IPR001079 GO:0030246
Aip01g02982 654 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE GALT1 105 646 - -
Aip01g02982 654 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 105 646 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aip01g02982 654 Gene3D - 189 379 - -
Aip01g02982 654 SUPERFAMILY Concanavalin A-like lectins/glucanases 191 380 IPR013320 -
Aip01g02982 654 CDD GLECT 191 377 IPR001079 GO:0030246
Aip01g02982 654 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 190 380 IPR001079 GO:0030246
Aip01g02982 654 Pfam Galactosyltransferase 420 602 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aip01g02982 654 SMART Gal_bind_lectin_2 194 379 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02982 Aip-Chr1 132168291 132172108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02982 14 654 Glycosyltransferase AT3G06440 50.464 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02982 K20843 - gmx:100816729 1069.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02982 01 132168291 132172108 Aip01g02982 01 132168291 132172108 ECH
Aip01g02982 01 132168291 132172108 Aip05g01891 05 54744613 54750214 PCT