Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01810 ATGGGGGCTTCTGAAAACAATTTCCTCCACGTCATTGCCAAGAACTTCGATGTTCTTGCACTGCCCTTGGTTACCCTCGTTTACCCTTTATATGCTTCAATCCAGGCCATAGAGACCAGGTCAATTGCTGATGACCAACAATGGCTCACATATTGGGTTCTCTATTCTTTGATAACACTCTTTGAGCTCACTTTTGCCAAAGTTCTTGAAGTGCTTGCCATATGGCCCTATGCCAAGTTGATACTTAGTTGCTGGTTGGTTCTTCCACACTTTAATGGCGCAGCGCATGTTTATAAGCAATACATTAGACCTTTCTATATGAACCCACAACTTCCGCACCTGCCGCAGATGCCACGAACTTCTCACATGTGGTATGTTCCAAGAAAGAACATATTCAGCAAGCAAGACGATGTTTTGACTGCGGCTGAGAGATACATGGAAGAGCATGGAACAGAAGCCTTTGAAAGACTCATAAGCAGGGATAGAGAAGCTAGAGCAAGGCATCATGGAGCATACACAAATGGAAATTACACAATCTTCAATGATGATTTTATATATTAG 561 0.4278 MGASENNFLHVIAKNFDVLALPLVTLVYPLYASIQAIETRSIADDQQWLTYWVLYSLITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYKQYIRPFYMNPQLPHLPQMPRTSHMWYVPRKNIFSKQDDVLTAAERYMEEHGTEAFERLISRDREARARHHGAYTNGNYTIFNDDFIY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01810 186 PANTHER HVA22-LIKE PROTEIN 2 185 - -
Aip05g01810 186 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
Aip05g01810 186 PANTHER HVA22-LIKE PROTEINS 2 185 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01810 Aip-Chr5 41338334 41340935 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01810 K17279 - gmx:100775940 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01810 05 41338334 41340935 Aip05g01810 05 41338334 41340935 ECH
Aip05g01810 05 41338334 41340935 Aip01g02085 01 113022595 113025576 PCT