Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02085 ATGAGTCATCTCAACGTGGTGGATTGCTACAGTGgaggagGGAAAAAGGAGGGTTCCTTGGAATTGGCGAATGTTTGTTTATTTTTGGGGCGCCACCAAAACCCACCCAGACCGGACTACTACCTTGCCACGACAGCACCACCTGCACCACCCTTCCTTTCTTTAATCCCCAAATTACAACCACCGCTTTTCCCTCACACATGTCTTCTTCTCTTCTCTAACACAACACTGAAAACAGTACTCATAGATCGATCAAAGATGGGATCTGGAGCTGGAAACTTCATCAAAGTCATTCTCAAGAACTTTGATGTTCTTGCTGGGCCGGTGATTAGTCTTGTTTATCCTCTGTATGCTTCAGTTAGGGCAATTGAGAGCAAGTCACCTGTGGATGATCAGCAGTGGCTCACTTACTGGGTTCTCTATTCCATGATCACTCTCTTTGAACTCACCTTCGCCAAACTTCTTGAATGGATTCCTATATGGCCCTACGCTAAGCTGATTATAACCTGCTGGTTGGTCCTTCCATACTTTAGTGGTGCTGCTTATGTTTACGAGCATTATGTGAGACCTTTCTTTGTTAATCCTCAGACAGTTAACATCTGGTATGTTCCAAGTAAAAAGGACAAATTGGGTAAGAAAGAGGACATTCTAACTGCTGCCGAGAAGTACATCCAAGAGAATGGAACACAAGAATTTGAGAATCTCATCCATAGGGCTGATAAATCAAGAAGCGATGGTGGTTATTACTCAATGTACCACGATGAGACCTATTGA 774 0.4328 MSHLNVVDCYSGGGKKEGSLELANVCLFLGRHQNPPRPDYYLATTAPPAPPFLSLIPKLQPPLFPHTCLLLFSNTTLKTVLIDRSKMGSGAGNFIKVILKNFDVLAGPVISLVYPLYASVRAIESKSPVDDQQWLTYWVLYSMITLFELTFAKLLEWIPIWPYAKLIITCWLVLPYFSGAAYVYEHYVRPFFVNPQTVNIWYVPSKKDKLGKKEDILTAAEKYIQENGTQEFENLIHRADKSRSDGGYYSMYHDETY 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02085 257 PANTHER HVA22-LIKE PROTEINS 90 247 IPR004345 -
Aip01g02085 257 PANTHER HVA22-LIKE PROTEIN 90 247 - -
Aip01g02085 257 Pfam TB2/DP1, HVA22 family 115 191 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02085 Aip-Chr1 113022595 113025576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02085 K17279 - gmx:100808701 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02085 01 113022595 113025576 Aip01g02085 01 113022595 113025576 ECH
Aip05g01810 05 41338334 41340935 Aip01g02085 01 113022595 113025576 PCT