Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01759 ATGGGAACCCTCACCACCATAGACCCACTCTTCCTCCTTTGCTGCGGACAAAATAATCTTCCAATTCAACAACGATCTTCCAATCACCACCACGAATTCAAACCCTTCTTCACTTGCTTTTCCACCAATAACAACAACAACGCATTTTCTACCACTACCACCTTTTTCCACCCCCATAGGTTTCTTTCTCATGTGGTTGCTGCTTCTGAAATCGACACGCCTAACGTGCAATGCTCCCCTCATCAATGCTCTGATGATCTGCTTTTCACCAATATTTTCCCAATCAAGAGAACACAAATGATGGAGGGAATGATTTTCGTGAGATTAGATCAGAGTAAGGATTTGAGGAATTGGGAGCTTACAGTGGGTTGCAATCTACCTGGAAAATGGACTCTTCATTGGGGAGTTTCCTATGTTGATGACATTGGGAGGGAGTGGGATAAACCTCCTTGTGATATGATACCGCCTGGATCTGTTACTATAAAGGACTATGCAATAGAGACACCCCTGAAAAAGTCATCAATATCTGCTGATGAAGGAGATACATTTTATGAAGTCAAGATTCCCGACAGCCCCGACAGCAAAATTTCCACAATTAATTTTGTTCTCAAGGATGACGAAAATGGAGCTTGGCATCAATATAAGGGAAGAGATTTCAAAGTTCCTTTGGCCAAATACCTTAAGACACCTAAAAGGGGCTTTAGTTTATGGCCAGGAGGTTTGACAAAGATATGTAACATTCTCCTGAAGTCAATAACAACAGTTCGCAATGATCAAGATAAAAGCAGTGAGCTAATTAATCCAAAACAGGAAAATGGTCAACTAGAAGGTTTCTGTATAGAAGTGCCTATCACAAAGGAGATTGATTTCAATAACTCTGTTACTGTCTCTGTTAAAAAGTGTTATCAGTCTGAGACATTAAAAAATGTCCTATATTTAGAAACTGACCTACCTGGAGATATTGTACTTCACTGGGGACTTTGCAGGGGCAATTCAAGAAGGTGGGAAGTTCCACCTGGTCCTCATCCACCAGGAACAGTACCGTATAAAGACAAAGCTTTGAGATCTCAACTGCAGGCAGGAGACAGTACAAAAGGATCTTCACTACAAATCACTTTAGGCGAAGAGTTTTCAGGATTTGCTTTTGTTCTTAAGCAAAATGAAACTTGGTTCAAATGCATGGGAAATGACTTTTACGTCTCCCTCTTGGGTTCTAATAGCATCCATAAAGAGGACCAACCAGAAGGTGTGGAGAGGGAATTGACCAAGGGGACAAGTCAAGATGCTTCTTTCCTTTCATTTACTGATGGAATATTCGGCGAAATAAGGAATTTGGTGACAGATATTTCCTCTAATAAGAACAGAAAGATAAAATTGAAAGAGCCACAAGAAAGCATTCTTCAAGAAATAGAAAGACTTGCTGCTGAAGCCTATAATATGTTCAAAAGCTCGGTTTCAACTTTCTCAGATGTAACTTCTACACTAGAGCCTGAGGCCACTGTTGTGGAGCCTGAGGCCGCTGTTGTGGAACCTGAACCTGCTGTTGGATCAAGAATATCGACTCTAGTTCCAAAAGTATGTTCTGCAGAAGGTACGGGATATGAAATATTATGCCAAGGGTTTAACTGGGAATCTCATAAATCTGGAAGATGGTATATGGAGCTTAAGGATAAGGCTTCAGAGCTAGCATCACTTGGCTTTACTGTAGTTTGGTTACCGCCGTGCACTGAGTCTGTTTCACCTGAAGGATACATGCCAAGGGATTTATATAACTTAAATTCAAGATACGGAAACATTGATGAACTGAAGGATTTGGTGAAAAAATTTCATGAACTTGGAATAAAAACTTTAGGAGATGCTGTTTTAAATCACCGTTGTGCTCATTATCAGAATCCTAACGGTGTTTGGAACTTATTTGGAGGGCGTCTCAACTGGGATGAACGTGCAATTGTTGCTGATGATCCTCATTTTCAGGGTAGGGGCAACAAGAGTAGTGGAGAGAATTTTGATGCTGCACCAAATATTGATCATTCACAGGAATTTGTGAGAAAGGATATTATAGAATGGTTATGCTGGTTGAGAAAAGAAGTTGGATATGATGGATGGAGGCTTGACTTTGCCAGAGGATTTTGGGGTGGCTATGTAAAGGACTACATTCAGGCAAGTGACCCTTATTTTGCTGTAGGAGAGTTTTGGGATTCCCTGAGTTACACAGATGGTGAATTGGATCATAATCAAGATGCTCATAGGCAGAGGATAGTTGATTGGATCAATGCTACCAATGGCACTGCTGGTGCATTTGATGTTACAACCAAAGGGATTCTTCACTCTGCATTTGAAAGATGTGAATACTGGCGATTGTCTGATAGTGGTGGAAATCCACCAGGAGTTATGGGGTGGTGGCCATCTCATGCTGTTACCTTTATTGAAAATCATGACACTGGTTCCACCCAGGGTCATTGGAGATTTCCGAGTGGAAAAGAAATGGAGGGATATGCTTACATTCTTACTCACCCTGGAACTCCATCAGTGTTCTTGGACCACATTTTCTCTCACAATAAAACAGAAGTAGCAACACTTATATCTATCAGGACTAGGAACAAGATCCACTGCAGGAGTGTGGTTCAGATTGTTAAGGCAGAATGGGATGTTTATGCATCTATCATTGATGAAAAAATTGCCATGAAGATTGGACCTGGCCACTTTGAACCCCCTGCTGGCTCCCAAAACTGGTCCTTCGCTATTGAGGGAAGAGACTATAAGATTTGGGAGGCAAAATAA 2781 0.4121 MGTLTTIDPLFLLCCGQNNLPIQQRSSNHHHEFKPFFTCFSTNNNNNAFSTTTTFFHPHRFLSHVVAASEIDTPNVQCSPHQCSDDLLFTNIFPIKRTQMMEGMIFVRLDQSKDLRNWELTVGCNLPGKWTLHWGVSYVDDIGREWDKPPCDMIPPGSVTIKDYAIETPLKKSSISADEGDTFYEVKIPDSPDSKISTINFVLKDDENGAWHQYKGRDFKVPLAKYLKTPKRGFSLWPGGLTKICNILLKSITTVRNDQDKSSELINPKQENGQLEGFCIEVPITKEIDFNNSVTVSVKKCYQSETLKNVLYLETDLPGDIVLHWGLCRGNSRRWEVPPGPHPPGTVPYKDKALRSQLQAGDSTKGSSLQITLGEEFSGFAFVLKQNETWFKCMGNDFYVSLLGSNSIHKEDQPEGVERELTKGTSQDASFLSFTDGIFGEIRNLVTDISSNKNRKIKLKEPQESILQEIERLAAEAYNMFKSSVSTFSDVTSTLEPEATVVEPEAAVVEPEPAVGSRISTLVPKVCSAEGTGYEILCQGFNWESHKSGRWYMELKDKASELASLGFTVVWLPPCTESVSPEGYMPRDLYNLNSRYGNIDELKDLVKKFHELGIKTLGDAVLNHRCAHYQNPNGVWNLFGGRLNWDERAIVADDPHFQGRGNKSSGENFDAAPNIDHSQEFVRKDIIEWLCWLRKEVGYDGWRLDFARGFWGGYVKDYIQASDPYFAVGEFWDSLSYTDGELDHNQDAHRQRIVDWINATNGTAGAFDVTTKGILHSAFERCEYWRLSDSGGNPPGVMGWWPSHAVTFIENHDTGSTQGHWRFPSGKEMEGYAYILTHPGTPSVFLDHIFSHNKTEVATLISIRTRNKIHCRSVVQIVKAEWDVYASIIDEKIAMKIGPGHFEPPAGSQNWSFAIEGRDYKIWEAK 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01759 926 Gene3D Glycosidases 535 868 - -
Aip05g01759 926 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 90 925 - -
Aip05g01759 926 Gene3D - 869 925 IPR013780 -
Aip05g01759 926 SMART alpha-amyl_c2 865 925 IPR012850 GO:0004556|GO:0005509|GO:0005975
Aip05g01759 926 SMART aamy 535 870 IPR006047 GO:0005975
Aip05g01759 926 CDD AmyAc_arch_bac_plant_AmyA 536 875 - -
Aip05g01759 926 Pfam Alpha-amylase C-terminal beta-sheet domain 866 924 IPR012850 GO:0004556|GO:0005509|GO:0005975
Aip05g01759 926 PANTHER ALPHA-AMYLASE 90 925 - -
Aip05g01759 926 SUPERFAMILY (Trans)glycosidases 534 851 IPR017853 -
Aip05g01759 926 Pfam Alpha amylase, catalytic domain 562 758 IPR006047 GO:0005975
Aip05g01759 926 SUPERFAMILY Glycosyl hydrolase domain 869 924 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01759 Aip-Chr5 36216318 36224654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01759 65 924 Glycoside Hydrolase AT1G69830 62.053 0.0 1090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01759 K01176 - gmx:100788193 1277.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04227 03 126509981 126518010 Aip05g01759 05 36216318 36224654 PCT