Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01459 ATGGACAAGAACTGCAGCAGCAACAGCTTCAACAGCATGAAGAGGCTTGCGTTCTCCGAACCCTTCATGTCACAGAGGAGAAAAGTAGTTTCTGGTTTCAGTTTAGGCCTTGGAGCTTCTCTCCTTTTTCTCACTCTTCTATTCCTCAACACTTCCCTTATACCTCCCAAAGTTCAAGTCTTTCTTCAAGGATCTGGTTCCGCCATTTCCAATTCTTCTTCTTCTTCCTTCTATTCTTGGTCATTTTCCATCAGAACCAAACATCCCTTCTCTTCTTCTTCTGCGGCGAATAATAATGATGCTTCTCTCACTGTGAGTTCCCCGCAGAGGGATGAAGAACGAATTGAAGAAAGTCGCGGAGTGAATGCTTCAAGTCAGGGTTTGAACAAGAACACACGGTTTGCGAATTTCACCGTCGGTGGTGAGAATGCAACGCTTAATAGTAGTGAAGTGCAACAGTTTCCGCTGAAATCCAACGCTGAGAACGTTACATTGGTCACTGAGATTGGGAACTTCACTGATAATAGGGTTGTCAAAGATGTGGACTTTGCTGCGAATGCAACTGTTTCTTCTTCTGGTGAATCAAACGTGACTTCTGTTAATAATAATAATAATAACAATAATAATAATGATAATGTAACTGTGGTTATTGATGATGGTGGTTCTTCTTCACAAGATGTGAAGATGGAGGGTCGTTTTAGTTTAAATGATGAGAATTGTGATATCTATGATGGTATGTGGGTAAGGGATGATTCAAAGCCATATTACCCCTTAGGTTCATGTCCACTCATCGATAGGGATTTTGATTGCCACCTTAATGGAAGGCCTGATAGTGATTATGTGAAATGGAAATGGCAGCCACATAAATGCGACATTCCAAGTTTGAAAGCAACTGATTTTCTGGAGAGACTGCGAGGTCAGAGGCTAGTTTTTGTGGGGGATTCACTGAACAGGAACATGTGGGAGTCGATGGTGTGTATACTACGTCAAAGTGTCAAGGACAAGAAACGTGTTTTTGAAATTTCTGGAAGACATGAATTTAAGAAGAAAGGTGTTTATGCTTTTAGATTTGAGGATTATAATTGCTCAGTAGATTTTGTTAGTTCACCATTCATTGTTCGAGAGTCAACTTTCAAAGGCATAAATGGATCATTTGAGACATTAAGATTGGATTTGATGGACCAGACAACTACTGTATATCATGATGCTGATATCATTGTCTTCAATACTGGCCACTGGTGGACGCATGAAAAAACATCTAAGGGAGAAGACTACTATCAAGAAGGCAACCATGTATACCCAAGACTCAAGGTTTTGGATGCATTTAGAAGGGCTTTGACGACTTGGGCTAGATGGGTCGACAAAAATATTGATGCCAACCGAACTCAGGTTGTCTTCAGAGGATACTCAAATACCCATTTCAGAGGTGGGCAATGGAACTCCGGAGGGCAGTGCCATAAAGAAACGGAGCCGATATATAACACAACTCACTTAAAGAAATACCCTTCAAAAATGAGGGCTTTAGACAATGTCATCTCAAAAATGAAAACACCAGTGATGTATATGAACATATCAAGGCTAACAGATTACAGAAAAGATGGCCATCCTTCTATATACAGAATGGAGTACAAGACCGAAGCCGAAAGGGCTGCCGCCGAGCTACACCAAGATTGCAGCCATTGGTGCCTGCCTGGAGTACCGGATACTTGGAACGAATTACTCTATGCTTCTCTCTTGAAATCTGGAAGAGGCAGTTGGAAAAGCTGA 1767 0.4143 MDKNCSSNSFNSMKRLAFSEPFMSQRRKVVSGFSLGLGASLLFLTLLFLNTSLIPPKVQVFLQGSGSAISNSSSSSFYSWSFSIRTKHPFSSSSAANNNDASLTVSSPQRDEERIEESRGVNASSQGLNKNTRFANFTVGGENATLNSSEVQQFPLKSNAENVTLVTEIGNFTDNRVVKDVDFAANATVSSSGESNVTSVNNNNNNNNNNDNVTVVIDDGGSSSQDVKMEGRFSLNDENCDIYDGMWVRDDSKPYYPLGSCPLIDRDFDCHLNGRPDSDYVKWKWQPHKCDIPSLKATDFLERLRGQRLVFVGDSLNRNMWESMVCILRQSVKDKKRVFEISGRHEFKKKGVYAFRFEDYNCSVDFVSSPFIVRESTFKGINGSFETLRLDLMDQTTTVYHDADIIVFNTGHWWTHEKTSKGEDYYQEGNHVYPRLKVLDAFRRALTTWARWVDKNIDANRTQVVFRGYSNTHFRGGQWNSGGQCHKETEPIYNTTHLKKYPSKMRALDNVISKMKTPVMYMNISRLTDYRKDGHPSIYRMEYKTEAERAAAELHQDCSHWCLPGVPDTWNELLYASLLKSGRGSWKS 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01459 588 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 292 576 IPR026057 GO:0016740
Aip05g01459 588 Pfam PMR5 N terminal Domain 239 291 IPR025846 -
Aip05g01459 588 MobiDBLite consensus disorder prediction 192 211 - -
Aip05g01459 588 MobiDBLite consensus disorder prediction 90 127 - -
Aip05g01459 588 MobiDBLite consensus disorder prediction 90 106 - -
Aip05g01459 588 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 20 586 - -
Aip05g01459 588 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 20 586 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01459 Aip-Chr5 23147739 23151862 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01459 - - adu:107488803 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01459 05 23147739 23151862 Aip05g01459 05 23147739 23151862 PCT
Aip01g01658 01 63190341 63194024 Aip05g01459 05 23147739 23151862 PCT