Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01419 ATGGAGAATTTTGAAAATGTACAGAGCGAGCCGCTGCTTGGATCGGGAAACCAGATCGGAATCCGCGACACGGCGGCCGTTTTCACAACAAAATCCGATGACATCCCTCCAATAAACGGAATCAGAGATTTCTTGAGAGAGTTCTCCATTGAGATCAAGAAGCTGTGGTACCTGGCTGGCCCCGCCATCTTCACTTCCCTTAGCCAGTATTCGCTTGGCGCCATCACTCTACTCCTCGCCGGACACATCAGCACCATTGCCCTTGCTGCCGTCTCCGTCGAGAACTCCGTCATTGCAGGCTTCTGCTTTGGCGTCATGCTTGGGATGGGAAGTGCGTTGGAGACATTGTGTGGGCAAGCCGTTGGAGCGGGTAAACTAGACATGTTGGGTGTGTACATGCAAAGATCATGGGTCATCCTCAACACAACTGCCCTCCTCCTTTGCCTTTTATACATTTTTGCGCGCCAACTCCTAAAAGCCATCGGAGAAACAACCGCAATTGCCGAGGCGGCCGGCGTTTTCGCCGTCTGGATGATCCCGCAGCTGTTCGCCTACTCCATGAATTTTCCAATTCAGAAGTTCTTGCAAGCACAAAGCAAGATTATGGTCATGGCTTGGATTTCCGCCGCGGCGCTCGTAGCGCACGCGGGGCTAAGCTGGGTCTTGATGCTTAAAGTGGGGTGGGGCCTTGTTGGTGCGGCGGTGGTTTTGAATGTGACGTGGTGGTTCATAGTTGTGGATCAGTTGGCATATATATTTGGTGGTAGTTGCGGTGAAGCGTGGAGTGGCTTCTCCTTGCAAGCATTTCATAATCTTTGGGGTTTTCTTCGTCTCTCATTTGCCTCTGCTGTCATGCTTTGCCTGGAAGTTTGGTACTTTATGGCCCTAATTCTGATGGCTGGTTATCTCAAGAACCCAGAAGTTGCGGTGGATGCAATGTCCATTTGCATGAACATATTGGGATTGACAGTGATGTTAGCATTCGGAATGAATGCAGCAGTAAGTGTGAGAGTGTCAAATGAATTGGGGGCAGGTCATCCAAGAACAGCGAAATTCGCTGTAGCTGTGGCTGTGATTAGTTCATTTGCGATTGCTTTAGTGCTCTCCATGATTCTCGTCATATTCAGGAAGCAATACCCTTCACTGTTTTCAACGGACGAAGATGTGAAAGAGCTTGTGATAGAGCTGACACCCATGTTGGCGTTGTGCATTATAATCAACAACGTGCAACCAGTTCTTTCAGGTGTGGCTGTTGGGGCAGGCTGGCAAGCTATCGTTGCTTGTGTCAACATTGCTTGCTACTACATTTTTGGTATTCCTCTTGGACTTCTTTTGGGCTTCATGCTTGACTTGGGTGTCCTTGGAATTTGGTCTGGAATGTTGTCTGGGATAGTCCTACAAACTTGTGTGCTATTCTTCATGATCTACAAAACGAATTGGAATAAAGAGGCTTCTCTTGCTGAAAATAGGATAAAGAAGTGGGGAGGTTATAAAGATACAAAAGTGAATCAGATTGTGGAGGATATTCAAGAAGCATGA 1539 0.4795 MENFENVQSEPLLGSGNQIGIRDTAAVFTTKSDDIPPINGIRDFLREFSIEIKKLWYLAGPAIFTSLSQYSLGAITLLLAGHISTIALAAVSVENSVIAGFCFGVMLGMGSALETLCGQAVGAGKLDMLGVYMQRSWVILNTTALLLCLLYIFARQLLKAIGETTAIAEAAGVFAVWMIPQLFAYSMNFPIQKFLQAQSKIMVMAWISAAALVAHAGLSWVLMLKVGWGLVGAAVVLNVTWWFIVVDQLAYIFGGSCGEAWSGFSLQAFHNLWGFLRLSFASAVMLCLEVWYFMALILMAGYLKNPEVAVDAMSICMNILGLTVMLAFGMNAAVSVRVSNELGAGHPRTAKFAVAVAVISSFAIALVLSMILVIFRKQYPSLFSTDEDVKELVIELTPMLALCIIINNVQPVLSGVAVGAGWQAIVACVNIACYYIFGIPLGLLLGFMLDLGVLGIWSGMLSGIVLQTCVLFFMIYKTNWNKEASLAENRIKKWGGYKDTKVNQIVEDIQEA 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01419 512 PANTHER PROTEIN DETOXIFICATION 31 21 494 - -
Aip05g01419 512 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 494 - -
Aip05g01419 512 TIGRFAM matE: MATE efflux family protein 61 457 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip05g01419 512 CDD MATE_eukaryotic 51 485 IPR045069 GO:0042910|GO:1990961
Aip05g01419 512 Pfam MatE 282 443 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip05g01419 512 Pfam MatE 61 221 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01419 Aip-Chr5 21703404 21715833 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01419 K03327 - gmx:100783627 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01419 05 21703404 21715833 Aip05g01419 05 21703404 21715833 ECH
Aip05g01419 05 21703404 21715833 Aip03g04087 03 124532621 124536566 PCT