Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04087 ATGGAGGGAGAGGGACAAGATCATAACAACAACTACACTCGCCCTCTTCTCACACCGCCGCCGCCCGCCGCCGTATTCACCACAGAATCCCATGACATCCCTCCGATCAGCAGCCCCAGAATCTTCGGCAGGGAGTTTCTCCTCGAGTCCAAGAAGCTCTGGTACCTGGCCGGCCCTGCCATCTTCACCTCTGTCTGCCAGTACTCACTCGGCGCCATCACTCAGCTCTTCGCTGGCCACGTTGGCACCTTAGAGCTCGCCGCTGTCTCTGTCGAGAACTCCGTCATCGCCGGCTTCTGCTTCGGCATCATGCTTGGGATGGGAAGTGCGTTGGAAACGCTATGCGGACAAGCGTTCGGAGCGGGACAATTGAGGATGTTAGGGATTTACATGCAACGATCATGGGTCATTCTCAACACCACCTGCTTGATCCTCAGCCTTCTCTACGTCTTCGCCAAGCCGCTCCTCAATTTTATTGGCCAGACGGCCGCCATATCCAAGGCGGCGGGGGAGTTCGCCGTCTGGATGATACCGCAGCTCTTCGCATACGCCATGAATTTCCCGATCCAGAAGTTCCTGCAGGCGCAAAGCAAGATCATGGTCATGGCTTGGATAGCAGCGGCGGCGCTTGTGATGCATCTGCTGCTCAGCTGGCTGCTCATGCTGAGGCTGGGCTGGGGGCTGGTCGGGGCCGCGGTGGTGCTGAACGGGTCCTGGTGGTTCATAGTGGTGGCGCAGCTTGTGTACATCCTGAGCGGCACGTGCGGGAACGCGTGGAGTGGCTTCTCGCTAAAGGCGTTTGAGAATCTCTGGGGATTCGTTCGTCTCTCCCTTGCATCTGCAGTTATGCTCTGGTATCAAAATTTAAATTTATTTATTTCTTGCATGAACATCTTGGGTTGGACCGTGATGGTATCCTTTGGAATGAATGCAGCAGTAAGTGTGAGGGTGTCAAATGAACTAGGGGCATCACACCCAAGAGCAGCGAAATTCTCGCTAGTGGTAGCAGTGATAACATCGTTTGTGCTGGGTCTAGCAATGTCACTGGTTCTTATCATGTTCAGGAAGCAATACCCTTCCTTGTTCTCAAATGATTCAGCGGTGAAGGAACTGGTGATGGAGCTGACACCAATGTTGGCCTTTTGCATCATCATCAACAATGTTCAGCCTGTTCTTTCAGGTGTTGCCGTTGGGGCAGGGTGGCAGAGTCTTGTTGCCTATGTCAACATTGCTTGTTACTATCTTTTTGGTGTTCCTCTTGGACTTATTTTGGGCTATGCGCTTGACTTTGGTGTCATTGGGATCTGGTCTGGGATGCTCACGGGGACCATTGTCCAAACTTGTGTTCTATTCATCATAGTATATAGAACTGACTGGGACAAAGAGGCCTCCCTTGCAGAAGATAGAATAAAGAAGTGGGGTGGGCATAAAGATTCAAAATCCAATGGTGTCGCAAATAATGATCAGCAAACATGA 1476 0.5203 MEGEGQDHNNNYTRPLLTPPPPAAVFTTESHDIPPISSPRIFGREFLLESKKLWYLAGPAIFTSVCQYSLGAITQLFAGHVGTLELAAVSVENSVIAGFCFGIMLGMGSALETLCGQAFGAGQLRMLGIYMQRSWVILNTTCLILSLLYVFAKPLLNFIGQTAAISKAAGEFAVWMIPQLFAYAMNFPIQKFLQAQSKIMVMAWIAAAALVMHLLLSWLLMLRLGWGLVGAAVVLNGSWWFIVVAQLVYILSGTCGNAWSGFSLKAFENLWGFVRLSLASAVMLWYQNLNLFISCMNILGWTVMVSFGMNAAVSVRVSNELGASHPRAAKFSLVVAVITSFVLGLAMSLVLIMFRKQYPSLFSNDSAVKELVMELTPMLAFCIIINNVQPVLSGVAVGAGWQSLVAYVNIACYYLFGVPLGLILGYALDFGVIGIWSGMLTGTIVQTCVLFIIVYRTDWDKEASLAEDRIKKWGGHKDSKSNGVANNDQQT 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04087 491 PANTHER PROTEIN DETOXIFICATION 31 19 473 - -
Aip03g04087 491 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 473 - -
Aip03g04087 491 CDD MATE_eukaryotic 49 464 IPR045069 GO:0042910|GO:1990961
Aip03g04087 491 Pfam MatE 59 219 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip03g04087 491 Pfam MatE 294 422 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04087 Aip-Chr3 124532621 124536566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04087 K03327 - gmx:100783627 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01419 05 21703404 21715833 Aip03g04087 03 124532621 124536566 PCT