Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01147 ATGGCTTCTCGCGTCAGCATCAACTTCCCTTCTTCTACTCCACCTTCCTCCCCTTATTTAAATCCCTTTCGTTCTTCTCATAACAACCTTCCTTCTAATAATACTCAGTCATTTTCTTCCCACTCTTCTTCGTCTCTCAACTCCTCTTTAACTACCTCTAATATGGCTCCTAAAACTGTCCTCGTTACCGGCGGTGCCGGTTACATCGGCAGCCACACCGTCCTTCAGCTCCTTCTCGGCGGCTTCAGGACCGTCGTTGTTGATAACTTGGATAATTCTTCCGAAGTTGCCATCCACAGAGTCAAGGAGCTCGCCGGTGAATTCGCTGGCAACCTCATCTTTCACCAGACTGACCTCAGAGACAGAGCTGCACTTGAGCAAATATTTGCTTCCACAAAGTTTGATGCTGTGATACATTTTGCTGGACTGAAAGCAGTAGGTGAAAGTGTGCAGAAACCGTTACTGTATTATAACAACAACTTGATTGGGACAATCACTCTGTTGGAAGTGATGGCTGCTCATGGATGCAAGAAGCTTGTGTTCTCATCTTCAGCCACCGTATATGGTTGGCCAAAGGAGGTTCCATGTACGGAAGAGTTCCCTCTGTCAGCAATGAATCCATATGGACGAACTAAGCTTACCATTGAAGAAATTTGTCGTGATGTTTACCATTCTGAGCAAGACTGGAAAATAATATTGTTGAGATACTTCAACCCAGTGGGCGCACATCCTAGTGGTCATATTGGGGAGGATCCTCGTGGAATTCCAAACAATCTGATGCCATTTGTTCAGCAAGTAGCAGTTGGCAGGCGGCCTGCACTAACAGTCTTTGGAACTGATTATAATACCGTTGACGGCACTGGGGTTCGTGATTACATTCATGTTGTCGATTTAGCAGACGGGCACATTGCCGCATTGCTTAAACTGGATGAACCTAATATAGGCTGTGAGGTTTATAACTTGGGCACTGGAAAGGGGACATCAGTGCTGGAGATGGTTAAAGCTTTTGAAAAAGCCTCTGGAAAGAAAATTCCACTTGTGATGGCTGGCCGAAGAGCTGGGGATGCTGAAATTGTTTATGCATCAACAGAGAAAGCAGAAAGAGAACTTAAGTGGAAGGCAAAATACGGCGTTGAGGAGATGTGCCGTGACCAATGGAATTGGGCTAGCAAAAACCCTTATGGCTATGGATCTGAAGATTCTAAAGACACTACTGATTAG 1221 0.4537 MASRVSINFPSSTPPSSPYLNPFRSSHNNLPSNNTQSFSSHSSSSLNSSLTTSNMAPKTVLVTGGAGYIGSHTVLQLLLGGFRTVVVDNLDNSSEVAIHRVKELAGEFAGNLIFHQTDLRDRAALEQIFASTKFDAVIHFAGLKAVGESVQKPLLYYNNNLIGTITLLEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAMNPYGRTKLTIEEICRDVYHSEQDWKIILLRYFNPVGAHPSGHIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGTDYNTVDGTGVRDYIHVVDLADGHIAALLKLDEPNIGCEVYNLGTGKGTSVLEMVKAFEKASGKKIPLVMAGRRAGDAEIVYASTEKAERELKWKAKYGVEEMCRDQWNWASKNPYGYGSEDSKDTTD 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01147 406 TIGRFAM galE: UDP-glucose 4-epimerase GalE 60 394 IPR005886 GO:0003978|GO:0006012
Aip05g01147 406 CDD UDP_G4E_1_SDR_e 59 388 IPR005886 GO:0003978|GO:0006012
Aip05g01147 406 Pfam GDP-mannose 4,6 dehydratase 61 384 IPR016040 -
Aip05g01147 406 Gene3D - 248 389 - -
Aip05g01147 406 Gene3D - 60 329 - -
Aip05g01147 406 PANTHER UDP-GLUCOSE 4-EPIMERASE 55 400 - -
Aip05g01147 406 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 55 395 IPR036291 -
Aip05g01147 406 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 55 400 - -
Aip05g01147 406 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01147 Aip-Chr5 16732428 16736484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01147 59 388 Miscellaneous Gene Families AT4G00110 27.011 1.54e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01147 K01784 - gmx:100792137 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01147 05 16732428 16736484 Aip03g03030 03 92272688 92275996 PCT