Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03030 ATGGCCGCCAAAACCATCCTCGTCACCGGTGGGGCTGGCTACATCGGCAGCCACACCGTTCTCCAGCTCCTCAATGGCGGTTTCAAGGCCGTCATCGTCGACAACTACGACAATTCTTCCGAAATCGCCGTCGAGAGGGTCAAGGGACTAGCTGGACAATTCGCCTCCAACCTCTCATGCCATAAGTTAGACCTCCGGGACAGAGAAGGACTTGAGAAAATTTTTGCTTCCACAAAGTTTGATGCTGTGATACATTTTGCTGGACTGAAAGCAGTAGGTGAAAGTGTGGAGAAACCACTGTACTACTTTAATAACAACTTGATTGGGACAATTGTGCTACTTGAAGTCATGGCTGCCCATGGATGCAAGAAGCTCGTGTTCTCATCTTCAGCCACTGTATATGGTTGGCCAAAGCAGGTCCCATGTACAGAAGAGTTCCCTTTGTCAGCAGCGAATCCATATGGACGAACCAAGCTTATGATCGAAGAAATTTGCCGTGATCTCTATCAATCAGATCATGGATGGAAAATAATATTGTTGAGATACTTCAACCCAGTGGGTGCACATCCTAGTGGAAATATTGGTGAGGATCCTCGTGGAATTCCAAACAATCTCATGCCATTTGTTCAGCAAGTAGCTGTCGGCAGACGCCCTGCACTGACAATTTTTGGAACTGACTATAAAACAAGCGATGGCACTGGAGTTCGCGATTACATTCATGTTGTTGATTTAGCAGATGGCCACATAGCTGCATTGAATAAACTAGAGGATCCTAAAATAGGTTGTGAAGTTTATAACTTGGGAACTGGAAAGGGGACGTCGGTTTTGGAGATGGTCAAAGCTTTTGAAAATGCCTCTGGAAAGAAAATTCCACTTAAAATGGCTGATCGGAGACCTGGTGATGCTGAAATCGTTTATGCATCAACAGATAAAGCATCAAAAGAACTCAATTGGAAGGCAAAATATGGCATTGACGAGATGTGCCGTGATCAATGGAATTGGGCTAGCAAAAATCCTTATGGATACGGATCTGCAGACTCTAAGAATTGA 1050 0.4486 MAAKTILVTGGAGYIGSHTVLQLLNGGFKAVIVDNYDNSSEIAVERVKGLAGQFASNLSCHKLDLRDREGLEKIFASTKFDAVIHFAGLKAVGESVEKPLYYFNNNLIGTIVLLEVMAAHGCKKLVFSSSATVYGWPKQVPCTEEFPLSAANPYGRTKLMIEEICRDLYQSDHGWKIILLRYFNPVGAHPSGNIGEDPRGIPNNLMPFVQQVAVGRRPALTIFGTDYKTSDGTGVRDYIHVVDLADGHIAALNKLEDPKIGCEVYNLGTGKGTSVLEMVKAFENASGKKIPLKMADRRPGDAEIVYASTDKASKELNWKAKYGIDEMCRDQWNWASKNPYGYGSADSKN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03030 349 TIGRFAM galE: UDP-glucose 4-epimerase GalE 6 340 IPR005886 GO:0003978|GO:0006012
Aip03g03030 349 Gene3D - 6 275 - -
Aip03g03030 349 Pfam GDP-mannose 4,6 dehydratase 7 330 IPR016040 -
Aip03g03030 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 341 IPR036291 -
Aip03g03030 349 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 1 346 - -
Aip03g03030 349 CDD UDP_G4E_1_SDR_e 5 334 IPR005886 GO:0003978|GO:0006012
Aip03g03030 349 Gene3D - 194 335 - -
Aip03g03030 349 PANTHER UDP-GLUCOSE 4-EPIMERASE 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03030 Aip-Chr3 92272688 92275996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03030 5 319 Miscellaneous Gene Families AT4G00110 28.097 1.31e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03030 K01784 - zju:107429837 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03030 03 92272688 92275996 Aip03g03030 03 92272688 92275996 ECH
Aip05g01147 05 16732428 16736484 Aip03g03030 03 92272688 92275996 PCT