Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01128 ATGGTGAAACATCGGTTGAGAGATTCTATGAAATCTTTATTTAAAAGCTACATCGACCCTGAAAAGGAAGCGCAGCTGAAAGGAGCTAAAGGAGAAATTCAAGACAAGGTGAAAAGAATATTGAAACTTATTAAAGATGAACATCTTGAAGAGGATGATGCTCCATTAGAACTTTCTAAGAAGGAATCACTTGTTAAATTGATAGAGGATTTCCACATTCAATACCAATCACTCTATGCAAAGTATGATAATCTAACAGATGAGTTGAGGAAAAAGATCATTGGCAAGAAAGGAAAGGAGAGTTTTTCTTCCAGCTCAGACTCGGATTCTGATTATTCTTCAATGGACAAAGACAGCAAAAATGGACAACTGGAAAATGAATTTCAAAAGACAATTAATGGCATGAAGCAAGAACTTCAAACAGCACAGAGGGAAGTTGCGGAATTAAATCAGAAGTTGACAATGACAAGTGAAGAGAAACAGGATCTAATGAAGAAACTTGAAAGTACTGAGAATGAGTCGTCTTCTAAAATAGCAAATTTATCATCTCAAATAAACAATCTGCTGGCCGAAATGGGTAAACTACATGCTCAGAAAACTGAAACTGAGGAAGAGATGAACAAAGCTACAGCACAAATGATGGTGCTCACTACCCAAGTTGACAACCTGCAAAGAGACTTACTATTGTTGCAGAAAGAGAAAGAAGAAATGATACTCCACTGTGAAAGAGCTGCAAAAAGTTTTTTAATGTTAGAGGATGAGAGAAATGGGTTTGCAACCAAAGCTTTGGATCTTAACAGAGCATTGGAAGAACGAGAAGATGCATATGAGAAGTTAAATGAAGAGTATATGCAAGTAGATAATTGGTATAAGGAATGCAAGGCGAAACTAGAAGCTGCAGAGAAGAAGATCCAAGTAATGACAGAAGAATTTCATGAAGACATTGGCTCAAAGGACCAGATGATAGCAGATTTGGAACAAACAACAGAAGACTTGAAAAGAGACCTTGAAGAGAAAGGAGATGAAATTAATACTTTACATGAGAATATTAGCATCCTTGAGGTTAAGCTTCGTATGTCAAACCAAAAGCTCCGGGTTGCTGATCAATTGCTAAGTGAGAAAGAGGAGGGCTTCAGGAAAGCAGAAGAGAAGTTCCATAACGATCAGAGATCACTTGAAGAGAGGATTGCCAAATTGTCAGCAACTATTGCTATTCAGGAGGATGCTTATCAGGAAATTGTGTTTGGCATTAAAGAAAGTGTGAACAGTGTGATGACTGGAACCGAAAATATTGTGTGGAAATTTGAGGATGAGTGTAAAAATTATGAGAACTATATCTCAAACATGTCACATGAGCTTCACATTGCAAGGAACTATGTCAGGGAGATGAACAAGGAAAAAGTGCAACTGAAGGAGAAAATAAACCATTTGGAGGAGCAACTACAGGATAAAAAGAAGCAGGAGTTGGATTTGAGGCAGATGGTGAAGAAGTTAGATGAAAAGGCAAGAGAGGAGGAACTAGCGAAGAAGAATCTAAGGACAAATGTAGTTCAACTTGAGAACACTATTGGAGAGCTACAAAAATTGGTGAAAGAGAAAGACCAAGGTATGTTGCAGTTGGCTGAGGAGAAGAGGGAGGCCATTAGGCAGCTGTGTCTGGGAATCGATTATCATCGCAGTCGTTATAAGACTCTCATGGACGTTGTATCAAGGACTCGCAGAGGCTAG 1728 0.3837 MVKHRLRDSMKSLFKSYIDPEKEAQLKGAKGEIQDKVKRILKLIKDEHLEEDDAPLELSKKESLVKLIEDFHIQYQSLYAKYDNLTDELRKKIIGKKGKESFSSSSDSDSDYSSMDKDSKNGQLENEFQKTINGMKQELQTAQREVAELNQKLTMTSEEKQDLMKKLESTENESSSKIANLSSQINNLLAEMGKLHAQKTETEEEMNKATAQMMVLTTQVDNLQRDLLLLQKEKEEMILHCERAAKSFLMLEDERNGFATKALDLNRALEEREDAYEKLNEEYMQVDNWYKECKAKLEAAEKKIQVMTEEFHEDIGSKDQMIADLEQTTEDLKRDLEEKGDEINTLHENISILEVKLRMSNQKLRVADQLLSEKEEGFRKAEEKFHNDQRSLEERIAKLSATIAIQEDAYQEIVFGIKESVNSVMTGTENIVWKFEDECKNYENYISNMSHELHIARNYVREMNKEKVQLKEKINHLEEQLQDKKKQELDLRQMVKKLDEKAREEELAKKNLRTNVVQLENTIGELQKLVKEKDQGMLQLAEEKREAIRQLCLGIDYHRSRYKTLMDVVSRTRRG 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01128 575 Coils Coil 453 546 - -
Aip05g01128 575 Coils Coil 125 240 - -
Aip05g01128 575 PANTHER COP1-INTERACTIVE PROTEIN 1 162 207 - -
Aip05g01128 575 PANTHER COP1-INTERACTIVE PROTEIN 1 203 573 - -
Aip05g01128 575 PANTHER COP1-INTERACTIVE PROTEIN 1 1 163 - -
Aip05g01128 575 Coils Coil 290 310 - -
Aip05g01128 575 Coils Coil 389 409 - -
Aip05g01128 575 Pfam KIP1-like protein 14 83 IPR011684 GO:0003779
Aip05g01128 575 Coils Coil 262 286 - -
Aip05g01128 575 MobiDBLite consensus disorder prediction 152 177 - -
Aip05g01128 575 MobiDBLite consensus disorder prediction 96 121 - -
Aip05g01128 575 MobiDBLite consensus disorder prediction 158 172 - -
Aip05g01128 575 Gene3D - 236 420 - -
Aip05g01128 575 PANTHER COP1-INTERACTIVE PROTEIN 1 162 207 - -
Aip05g01128 575 PANTHER COP1-INTERACTIVE PROTEIN 1 203 573 - -
Aip05g01128 575 PANTHER COP1-INTERACTIVE PROTEIN 1 1 163 - -
Aip05g01128 575 Coils Coil 318 349 - -
Aip05g01128 575 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 89 IPR011684 GO:0003779
Aip05g01128 575 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 305 367 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01128 Aip-Chr5 16242967 16244841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01128 490 570 EF-hand Containing Proteins AT5G05180 37.037 5.05e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01128 - - aip:107643113 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01128 05 16242967 16244841 Aip03g03067 03 94576752 94577593 PCT