Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip03g03067 | ATGGTGAAACATCGCTTTAGAGAGTCTATAAAATCTTTGTTTGGAAGTCATGTTGACCCTGAGAAAGAAGAGCAACTGCAGGGAGCTAAAACAGAAATTGATGACAAAGTGAAAAGGATATTGAAACTTATTAAAGATGACAACCTTGAAGAGGATGGCCCCCCTTTAGAGCAATCTAAGAAGGAACCACTTGTTGAACTGATTGAGGATTTCCACAATCAGTACCAATCGCTCTATGCACGATATGATCATTTGACAGGTGAGTTAAGGAAAAAGATTCATGGCAAGCAAGGAGAAAATGAGAGCTCATCGTCCAGTTCAGACTCAGATTCAGATTATTCTTCAAGAGACAAAGTCAGAAAAAATGGACAGCTGGAAAGTGACTTTCAAAAGATAATTGAAGGCTTAAAGCAAGAACTTGAAATGGCTAGTGTGGAAGTTGCTGAATTAAACCGGAGGTTGACAAGTACTCATGAAGAGAAGGAGGATCTTAACTCGAAATATGTTGCAGCATTGAGCAAGATAGAAGAAGCAGAGAAAATAAACATGGATTTGAAATCTGATGCTGAAGCATCGAGTATTCAAAGATCAAAACTTTTGGATGAAAATGCTGAACTAAAAAATCAACTGGACGTTGCTGGTAAGACAGAAGCTGACCTGAGTCAAAGATTGGAGGACTTGAAGACAGAAAAAGATA | 697 | 0.3831 | MVKHRFRESIKSLFGSHVDPEKEEQLQGAKTEIDDKVKRILKLIKDDNLEEDGPPLEQSKKEPLVELIEDFHNQYQSLYARYDHLTGELRKKIHGKQGENESSSSSSDSDSDYSSRDKVRKNGQLESDFQKIIEGLKQELEMASVEVAELNRRLTSTHEEKEDLNSKYVAALSKIEEAEKINMDLKSDAEASSIQRSKLLDENAELKNQLDVAGKTEADLSQRLEDLKTEKD | 232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip03g03067 | 232 | MobiDBLite | consensus disorder prediction | 208 | 232 | - | - | |
| Aip03g03067 | 232 | Coils | Coil | 133 | 181 | - | - | |
| Aip03g03067 | 232 | MobiDBLite | consensus disorder prediction | 218 | 232 | - | - | |
| Aip03g03067 | 232 | Coils | Coil | 189 | 232 | - | - | |
| Aip03g03067 | 232 | Pfam | KIP1-like protein | 14 | 83 | IPR011684 | GO:0003779 | |
| Aip03g03067 | 232 | ProSiteProfiles | Networked (NET) actin-binding (NAB) domain profile. | 10 | 89 | IPR011684 | GO:0003779 | |
| Aip03g03067 | 232 | MobiDBLite | consensus disorder prediction | 91 | 124 | - | - | |
| Aip03g03067 | 232 | PANTHER | COP1-INTERACTIVE PROTEIN 1 | 1 | 232 | - | - | |
| Aip03g03067 | 232 | PANTHER | COP1-INTERACTIVE PROTEIN 1 | 1 | 232 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip03g03067 | Aip-Chr3 | 94576752 | 94577593 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip03g03067 | - | K20478 | adu:107479777 | 427.557 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aip03g03067 | 03 | 94576752 | 94577593 | Aip03g03067 | 03 | 94576752 | 94577593 | ECH | |
| Aip05g01128 | 05 | 16242967 | 16244841 | Aip03g03067 | 03 | 94576752 | 94577593 | PCT |